RNA–Protein interactions for RNA: ENST00000492016.5

NELFCD-211, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 606 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-211ENST00000492016 PLLPQ9Y342 182 aa15.31■□□□□ 0.04
NELFCD-211ENST00000492016 MN1Q10571 1320 aaPredicted RBP15.31■□□□□ 0.04
NELFCD-211ENST00000492016 SUPT3HB4E1H0 165 aa15.3■□□□□ 0.04
NELFCD-211ENST00000492016 STX16-NPEPL1H3BU86 382 aa15.3■□□□□ 0.04
NELFCD-211ENST00000492016 STX16O14662 325 aa15.3■□□□□ 0.04
NELFCD-211ENST00000492016 PRPF4O43172 522 aaKnown RBP eCLIP15.3■□□□□ 0.04
NELFCD-211ENST00000492016 PLIN3O60664 434 aa15.3■□□□□ 0.04
NELFCD-211ENST00000492016 SUPT3HO75486 399 aa15.3■□□□□ 0.04
NELFCD-211ENST00000492016 TOP3BO95985 862 aaKnown RBP15.3■□□□□ 0.04
NELFCD-211ENST00000492016 FTH1P19P0C7X4 201 aa15.3■□□□□ 0.04
NELFCD-211ENST00000492016 TYRP1P17643 537 aa15.3■□□□□ 0.04
NELFCD-211ENST00000492016 POLR2CP19387 275 aaPredicted RBP15.3■□□□□ 0.04
NELFCD-211ENST00000492016 OAS2P29728 719 aaKnown RBP15.3■□□□□ 0.04
NELFCD-211ENST00000492016 SIM1P81133 766 aaPredicted RBP15.3■□□□□ 0.04
NELFCD-211ENST00000492016 NFKB2Q00653 900 aa15.3■□□□□ 0.04
NELFCD-211ENST00000492016 SPIDRQ14159 915 aa15.3■□□□□ 0.04
NELFCD-211ENST00000492016 SLC5A12Q1EHB4 618 aa15.3■□□□□ 0.04
NELFCD-211ENST00000492016 AMZ1Q400G9 498 aa15.3■□□□□ 0.04
NELFCD-211ENST00000492016 CAPN13Q6MZZ7 669 aaPredicted RBP15.3■□□□□ 0.04
NELFCD-211ENST00000492016 JPH3Q8WXH2 748 aaPredicted RBP15.3■□□□□ 0.04
NELFCD-211ENST00000492016 NCSTNQ92542 709 aa15.3■□□□□ 0.04
NELFCD-211ENST00000492016 GRAMD1AQ96CP6 724 aa15.3■□□□□ 0.04
NELFCD-211ENST00000492016 ATP6V1G3Q96LB4 118 aa15.3■□□□□ 0.04
NELFCD-211ENST00000492016 IL17FQ96PD4 163 aa15.3■□□□□ 0.04
NELFCD-211ENST00000492016 MIPEPQ99797 713 aa15.3■□□□□ 0.04
NELFCD-211ENST00000492016 CCDC177Q9NQR7 707 aaPredicted RBP15.3■□□□□ 0.04
NELFCD-211ENST00000492016 ACTR10Q9NZ32 417 aa15.3■□□□□ 0.04
NELFCD-211ENST00000492016 SEMA5BQ9P283 1151 aa15.3■□□□□ 0.04
NELFCD-211ENST00000492016 POMT2Q9UKY4 750 aa15.3■□□□□ 0.04
NELFCD-211ENST00000492016 PCDHB11Q9Y5F2 797 aa15.3■□□□□ 0.04
NELFCD-211ENST00000492016 TNPO3Q9Y5L0 923 aaKnown RBP15.3■□□□□ 0.04
NELFCD-211ENST00000492016 A0A1W2PPV9 198 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 HMGB1P1B2RPK0 211 aaPredicted RBP15.29■□□□□ 0.04
NELFCD-211ENST00000492016 D6RAR5 112 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 TMX2-CTNND1H3BSU7 103 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 UBXN8O00124 270 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 TK2O00142 265 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 TM9SF1O15321 606 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 CAPN5O15484 640 aaPredicted RBP15.29■□□□□ 0.04
NELFCD-211ENST00000492016 CCNDBP1O95273 360 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 PROCP04070 461 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 SBK3P0C264 359 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 GFAPP14136 432 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 CSF2RBP32927 897 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 SLC6A12P48065 614 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 NAA20P61599 178 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 TBPL1P62380 186 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 ABATP80404 500 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 TRA2AQ13595 282 aaKnown RBP eCLIP15.29■□□□□ 0.04
NELFCD-211ENST00000492016 PUM1Q14671 1186 aaKnown RBP eCLIP15.29■□□□□ 0.04
NELFCD-211ENST00000492016 SETDB1Q15047 1291 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 CDCP2Q5VXM1 449 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 NKAIN2Q5VXU1 208 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 LCTLQ6UWM7 567 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 MBOAT1Q6ZNC8 495 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 RBM44Q6ZP01 1051 aaKnown RBP15.29■□□□□ 0.04
NELFCD-211ENST00000492016 PRSS42Q7Z5A4 293 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 SLCO6A1Q86UG4 719 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 SLC22A9Q8IVM8 553 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 FBXO39Q8N4B4 442 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 LMNTD1Q8N9Z9 388 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 TMEM74Q96NL1 305 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 OR2A14Q96R47 310 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 HAUS8Q9BT25 410 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 CAPS2Q9BXY5 557 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 C1GALT1Q9NS00 363 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 WWOXQ9NZC7 414 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 CPSF2Q9P2I0 782 aaKnown RBP15.29■□□□□ 0.04
NELFCD-211ENST00000492016 CIDEBQ9UHD4 219 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 EMCNQ9ULC0 261 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 KLK4Q9Y5K2 254 aa15.29■□□□□ 0.04
NELFCD-211ENST00000492016 SPAARA0A1B0GVQ0 90 aa15.28■□□□□ 0.04
NELFCD-211ENST00000492016 GSAPA4D1B5 854 aa15.28■□□□□ 0.04
NELFCD-211ENST00000492016 KRT87PA6NCN2 255 aa15.28■□□□□ 0.04
NELFCD-211ENST00000492016 TLCD2A6NGC4 264 aa15.28■□□□□ 0.04
NELFCD-211ENST00000492016 ISM1B1AKI9 464 aa15.28■□□□□ 0.04
NELFCD-211ENST00000492016 TAPBPO15533 448 aa15.28■□□□□ 0.04
NELFCD-211ENST00000492016 STK16O75716 305 aa15.28■□□□□ 0.04
NELFCD-211ENST00000492016 ZWINTO95229 277 aa15.28■□□□□ 0.04
NELFCD-211ENST00000492016 ANKRD34CP0C6C1 535 aa15.28■□□□□ 0.04
NELFCD-211ENST00000492016 UGT2B7P16662 529 aa15.28■□□□□ 0.04
NELFCD-211ENST00000492016 ATP5F1P24539 256 aaPredicted RBP15.28■□□□□ 0.04
NELFCD-211ENST00000492016 HRH2P25021 359 aa15.28■□□□□ 0.04
NELFCD-211ENST00000492016 PRDX3P30048 256 aaKnown RBP15.28■□□□□ 0.04
NELFCD-211ENST00000492016 HOXD11P31277 338 aaPredicted RBP15.28■□□□□ 0.04
NELFCD-211ENST00000492016 RPA3P35244 121 aaPredicted RBP15.28■□□□□ 0.04
NELFCD-211ENST00000492016 PPM1FP49593 454 aaPredicted RBP15.28■□□□□ 0.04
NELFCD-211ENST00000492016 MAGOHP61326 146 aaKnown RBP15.28■□□□□ 0.04
NELFCD-211ENST00000492016 INSM1Q01101 510 aaPredicted RBP15.28■□□□□ 0.04
NELFCD-211ENST00000492016 CFHR1Q03591 330 aa15.28■□□□□ 0.04
NELFCD-211ENST00000492016 ZFP36L1Q07352 338 aaKnown RBP15.28■□□□□ 0.04
NELFCD-211ENST00000492016 NAE1Q13564 534 aa15.28■□□□□ 0.04
NELFCD-211ENST00000492016 FASTKQ14296 549 aaKnown RBP15.28■□□□□ 0.04
NELFCD-211ENST00000492016 PCBP2Q15366 365 aaKnown RBP eCLIP15.28■□□□□ 0.04
NELFCD-211ENST00000492016 PTCHD3Q3KNS1 767 aa15.28■□□□□ 0.04
NELFCD-211ENST00000492016 C16orf46Q6P387 395 aa15.28■□□□□ 0.04
NELFCD-211ENST00000492016 SPESP1Q6UW49 350 aa15.28■□□□□ 0.04
NELFCD-211ENST00000492016 ZYG11AQ6WRX3 759 aa15.28■□□□□ 0.04
NELFCD-211ENST00000492016 USP53Q70EK8 1073 aa15.28■□□□□ 0.04
NELFCD-211ENST00000492016 LRRC70Q7Z2Q7 622 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms