RNA–Protein interactions for RNA: ENST00000491729.1

LSS-210, Transcript of lanosterol synthase, human

TSL 2

Gene LSS, Length 2,143 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSS-210	ENST00000491729	EIF3L	Q9Y262	564 aa	Known RBP	12.83	□□□□□ -0.36
LSS-210	ENST00000491729	PPIL1	Q9Y3C6	166 aa		12.83	□□□□□ -0.36
LSS-210	ENST00000491729	ASB1	Q9Y576	335 aa		12.83	□□□□□ -0.36
LSS-210	ENST00000491729	PLXNB3	Q9ULL4	1909 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	KRBA1	A5PL33	1030 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	FAM149A	A5PLN7	773 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	C16orf96	A6NNT2	1141 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	SLC28A1	O00337	649 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	DLGAP1	O14490	977 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	OR7A17	O14581	309 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	DEAF1	O75398	565 aa	Predicted RBP	12.82	□□□□□ -0.36
LSS-210	ENST00000491729	TRMU	O75648	421 aa	Known RBP	12.82	□□□□□ -0.36
LSS-210	ENST00000491729	KCNH1	O95259	989 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	VARS	P26640	1264 aa	Known RBP	12.82	□□□□□ -0.36
LSS-210	ENST00000491729	IL12A	P29459	219 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	RPS9	P46781	194 aa	Known RBP	12.82	□□□□□ -0.36
LSS-210	ENST00000491729	NFATC2	Q13469	925 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	PWP1	Q13610	501 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	TTLL9	Q3SXZ7	439 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	GPR33	Q49SQ1	333 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	SULT1C3	Q6IMI6	304 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	TTC23L	Q6PF05	361 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	LPCAT2	Q7L5N7	544 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	PATL1	Q86TB9	770 aa	Known RBP	12.82	□□□□□ -0.36
LSS-210	ENST00000491729	SERPINA9	Q86WD7	417 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	RALGPS2	Q86X27	583 aa	Predicted RBP	12.82	□□□□□ -0.36
LSS-210	ENST00000491729	ERI1	Q8IV48	349 aa	Known RBP	12.82	□□□□□ -0.36
LSS-210	ENST00000491729	ZNF786	Q8N393	782 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	DHRSX	Q8N5I4	330 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	ZNF641	Q96N77	438 aa	Predicted RBP	12.82	□□□□□ -0.36
LSS-210	ENST00000491729	MCCC1	Q96RQ3	725 aa	Predicted RBP	12.82	□□□□□ -0.36
LSS-210	ENST00000491729	IPPK	Q9H8X2	491 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	ZFYVE1	Q9HBF4	777 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	PCDH12	Q9NPG4	1184 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	CD93	Q9NPY3	652 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	INTS7	Q9NVH2	962 aa	Known RBP	12.82	□□□□□ -0.36
LSS-210	ENST00000491729	ASIC5	Q9NY37	505 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	ATXN10	Q9UBB4	475 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	ANGPTL3	Q9Y5C1	460 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	NCOR1	O75376	2440 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	WDFY4	Q6ZS81	3184 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	TRBV5-4	A0A0C4DH59	114 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	C1orf232	A0A0U1RR37	186 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	EDDM13	A0A1B0GTR0	161 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729		H0YAE9	185 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	KPNA3	O00505	521 aa	Predicted RBP	12.82	□□□□□ -0.36
LSS-210	ENST00000491729	EI24	O14681	340 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	ACOX3	O15254	700 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	SRF	P11831	508 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	ACRV1	P26436	265 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	AKT1	P31749	480 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	TNFRSF4	P43489	277 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	RECQL	P46063	649 aa	Predicted RBP	12.82	□□□□□ -0.36
LSS-210	ENST00000491729	PTPN5	P54829	565 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	FZD5	Q13467	585 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	CCIN	Q13939	588 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	AP5B1	Q2VPB7	878 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	FAM98B	Q52LJ0	330 aa	Known RBP	12.82	□□□□□ -0.36
LSS-210	ENST00000491729	ZNF805	Q5CZA5	627 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	LRRC66	Q68CR7	880 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	SCIMP	Q6UWF3	145 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729		Q6ZS52	159 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	GPR141	Q7Z602	305 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	MILR1	Q7Z6M3	343 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	DNAJB8	Q8NHS0	232 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	FAM110B	Q8TC76	370 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	PNPT1	Q8TCS8	783 aa	Known RBP	12.82	□□□□□ -0.36
LSS-210	ENST00000491729	ESAM	Q96AP7	390 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	CGREF1	Q99674	301 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	RPF2	Q9H7B2	306 aa	Known RBP	12.82	□□□□□ -0.36
LSS-210	ENST00000491729	RDH14	Q9HBH5	336 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	ETAA1	Q9NY74	926 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	OPTC	Q9UBM4	332 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	TRPS1	Q9UHF7	1281 aa		12.82	□□□□□ -0.36
LSS-210	ENST00000491729	POLR3H	Q9Y535	204 aa	Predicted RBP	12.82	□□□□□ -0.36
LSS-210	ENST00000491729	LRRK1	Q38SD2	2015 aa		12.81	□□□□□ -0.36
LSS-210	ENST00000491729	BDP1	A6H8Y1	2624 aa		12.81	□□□□□ -0.36
LSS-210	ENST00000491729	CLOCK	O15516	846 aa		12.81	□□□□□ -0.36
LSS-210	ENST00000491729	CBSL	P0DN79	551 aa		12.81	□□□□□ -0.36
LSS-210	ENST00000491729	RAP2A	P10114	183 aa		12.81	□□□□□ -0.36
LSS-210	ENST00000491729	G6PD	P11413	515 aa		12.81	□□□□□ -0.36
LSS-210	ENST00000491729	UGT1A6	P19224	532 aa		12.81	□□□□□ -0.36
LSS-210	ENST00000491729	HRH2	P25021	359 aa		12.81	□□□□□ -0.36
LSS-210	ENST00000491729	DRD3	P35462	400 aa		12.81	□□□□□ -0.36
LSS-210	ENST00000491729	CBS	P35520	551 aa		12.81	□□□□□ -0.36
LSS-210	ENST00000491729	ELAVL3	Q14576	367 aa	Known RBP	12.81	□□□□□ -0.36
LSS-210	ENST00000491729	CDKL4	Q5MAI5	379 aa		12.81	□□□□□ -0.36
LSS-210	ENST00000491729	GLYAT	Q6IB77	296 aa		12.81	□□□□□ -0.36
LSS-210	ENST00000491729	SLC2A7	Q6PXP3	512 aa		12.81	□□□□□ -0.36
LSS-210	ENST00000491729	FAM151B	Q6UXP7	276 aa		12.81	□□□□□ -0.36
LSS-210	ENST00000491729	TMEM92	Q6UXU6	159 aa		12.81	□□□□□ -0.36
LSS-210	ENST00000491729	DLEU7	Q6UYE1	221 aa		12.81	□□□□□ -0.36
LSS-210	ENST00000491729	MACC1	Q6ZN28	852 aa		12.81	□□□□□ -0.36
LSS-210	ENST00000491729	TPRG1	Q6ZUI0	275 aa		12.81	□□□□□ -0.36
LSS-210	ENST00000491729	FAM9C	Q8IZT9	166 aa		12.81	□□□□□ -0.36
LSS-210	ENST00000491729	CBARP	Q8N350	705 aa	Predicted RBP	12.81	□□□□□ -0.36
LSS-210	ENST00000491729	ZBTB2	Q8N680	514 aa		12.81	□□□□□ -0.36
LSS-210	ENST00000491729	GPR26	Q8NDV2	337 aa		12.81	□□□□□ -0.36
LSS-210	ENST00000491729	CYGB	Q8WWM9	190 aa		12.81	□□□□□ -0.36
LSS-210	ENST00000491729	BIRC7	Q96CA5	298 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms