RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 AQP12AQ8IXF9 295 aa22.18■■□□□ 1.14
USF3-203ENST00000491165 MINDY1Q8N5J2 469 aa22.18■■□□□ 1.14
USF3-203ENST00000491165 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.18■■□□□ 1.14
USF3-203ENST00000491165 ZSCAN5AQ9BUG6 496 aa22.18■■□□□ 1.14
USF3-203ENST00000491165 COL25A1Q9BXS0 654 aaPredicted RBP22.18■■□□□ 1.14
USF3-203ENST00000491165 DDX18Q9NVP1 670 aaKnown RBP22.18■■□□□ 1.14
USF3-203ENST00000491165 SOCS2O14508 198 aa22.18■■□□□ 1.14
USF3-203ENST00000491165 LAMTOR5O43504 91 aa22.18■■□□□ 1.14
USF3-203ENST00000491165 MATN4O95460 622 aa22.18■■□□□ 1.14
USF3-203ENST00000491165 CAPN3P20807 821 aa22.18■■□□□ 1.14
USF3-203ENST00000491165 ACRV1P26436 265 aa22.18■■□□□ 1.14
USF3-203ENST00000491165 FOXA1P55317 472 aa22.18■■□□□ 1.14
USF3-203ENST00000491165 B4GALNT1Q00973 533 aa22.18■■□□□ 1.14
USF3-203ENST00000491165 BNIP2Q12982 314 aa22.18■■□□□ 1.14
USF3-203ENST00000491165 GRB7Q14451 532 aa22.18■■□□□ 1.14
USF3-203ENST00000491165 INPP5AQ14642 412 aa22.18■■□□□ 1.14
USF3-203ENST00000491165 LRRC23Q53EV4 343 aaPredicted RBP22.18■■□□□ 1.14
USF3-203ENST00000491165 ZNF765Q7L2R6 523 aa22.18■■□□□ 1.14
USF3-203ENST00000491165 BMP8AQ7Z5Y6 402 aa22.18■■□□□ 1.14
USF3-203ENST00000491165 TRIM74Q86UV6 250 aa22.18■■□□□ 1.14
USF3-203ENST00000491165 PHYKPLQ8IUZ5 450 aa22.18■■□□□ 1.14
USF3-203ENST00000491165 NXPE1Q8N323 547 aa22.18■■□□□ 1.14
USF3-203ENST00000491165 PACRGLQ8N7B6 248 aa22.18■■□□□ 1.14
USF3-203ENST00000491165 TFB2MQ9H5Q4 396 aaKnown RBP22.18■■□□□ 1.14
USF3-203ENST00000491165 OLAHQ9NV23 265 aa22.18■■□□□ 1.14
USF3-203ENST00000491165 GIMAP2Q9UG22 337 aa22.18■■□□□ 1.14
USF3-203ENST00000491165 CRLS1Q9UJA2 301 aa22.18■■□□□ 1.14
USF3-203ENST00000491165 LRRC14BA6NHZ5 514 aa22.17■■□□□ 1.14
USF3-203ENST00000491165 H0Y8X5 98 aa22.17■■□□□ 1.14
USF3-203ENST00000491165 HNRNPRO43390 633 aaKnown RBP22.17■■□□□ 1.14
USF3-203ENST00000491165 MTHFD2P13995 350 aa22.17■■□□□ 1.14
USF3-203ENST00000491165 HSD17B1P14061 328 aa22.17■■□□□ 1.14
USF3-203ENST00000491165 GFAPP14136 432 aa22.17■■□□□ 1.14
USF3-203ENST00000491165 LBPP18428 481 aa22.17■■□□□ 1.14
USF3-203ENST00000491165 OGNP20774 298 aaKnown RBP22.17■■□□□ 1.14
USF3-203ENST00000491165 OXTRP30559 389 aa22.17■■□□□ 1.14
USF3-203ENST00000491165 IGFALSP35858 605 aa22.17■■□□□ 1.14
USF3-203ENST00000491165 SGCGQ13326 291 aa22.17■■□□□ 1.14
USF3-203ENST00000491165 TBCELQ5QJ74 424 aa22.17■■□□□ 1.14
USF3-203ENST00000491165 DTWD2Q8NBA8 298 aa22.17■■□□□ 1.14
USF3-203ENST00000491165 B4GALNT2Q8NHY0 566 aa22.17■■□□□ 1.14
USF3-203ENST00000491165 ATOH8Q96SQ7 321 aa22.17■■□□□ 1.14
USF3-203ENST00000491165 LGR4Q9BXB1 951 aa22.17■■□□□ 1.14
USF3-203ENST00000491165 GID8Q9NWU2 228 aa22.17■■□□□ 1.14
USF3-203ENST00000491165 DHRS12A0PJE2 317 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 NELFEP18615 380 aaKnown RBP22.16■■□□□ 1.14
USF3-203ENST00000491165 SLC5A2P31639 672 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 ALDH3B2P48448 385 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 TUBA4AP68366 448 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 SRSF5Q13243 272 aaKnown RBP22.16■■□□□ 1.14
USF3-203ENST00000491165 GPRC6AQ5T6X5 926 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 PNCKQ6P2M8 343 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 SLC15A3Q8IY34 581 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 HM13Q8TCT9 377 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 TRPC4APQ8TEL6 797 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 TUBGCP3Q96CW5 907 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 NSUN5Q96P11 429 aaKnown RBP22.16■■□□□ 1.14
USF3-203ENST00000491165 ORAI3Q9BRQ5 295 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 AARSD1Q9BTE6 412 aaKnown RBP22.16■■□□□ 1.14
USF3-203ENST00000491165 TIMMDC1Q9NPL8 285 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 SDR39U1Q9NRG7 319 aaPredicted RBP22.16■■□□□ 1.14
USF3-203ENST00000491165 RSL24D1Q9UHA3 163 aaKnown RBP22.16■■□□□ 1.14
USF3-203ENST00000491165 AURKCQ9UQB9 309 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 OR1A2Q9Y585 309 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 POM121BA6NF01 834 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 H3BMM5 538 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 HOXA6P31267 233 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 GPR1P46091 355 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 CLDN2P57739 230 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 CSTF1Q05048 431 aaKnown RBP22.16■■□□□ 1.14
USF3-203ENST00000491165 GPR33Q49SQ1 333 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 CLDN19Q8N6F1 224 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 GOLM1Q8NBJ4 401 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 FAM110BQ8TC76 370 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 TFAP2CQ92754 450 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 KCNA7Q96RP8 456 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 CLK4Q9HAZ1 481 aaKnown RBP22.16■■□□□ 1.14
USF3-203ENST00000491165 RAD18Q9NS91 495 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 SMOXQ9NWM0 555 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 POLG2Q9UHN1 485 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.16■■□□□ 1.14
USF3-203ENST00000491165 OAS3Q9Y6K5 1087 aaKnown RBP22.16■■□□□ 1.14
USF3-203ENST00000491165 PRSS21Q9Y6M0 314 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 THADAQ6YHU6 1953 aa22.16■■□□□ 1.14
USF3-203ENST00000491165 SAC3D1A6NKF1 404 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 FXYD1O00168 92 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 TRMUO75648 421 aaKnown RBP22.15■■□□□ 1.14
USF3-203ENST00000491165 HGFP14210 728 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 IL10P22301 178 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 PSMA4P25789 261 aaKnown RBP22.15■■□□□ 1.14
USF3-203ENST00000491165 PCSK6P29122 969 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 AVPR2P30518 371 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 RPS6KA2Q15349 733 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 COQ5Q5HYK3 327 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 INTS11Q5TA45 600 aaKnown RBP22.15■■□□□ 1.14
USF3-203ENST00000491165 KIAA0895LQ68EN5 471 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 LCN8Q6JVE9 175 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 SPPL2CQ8IUH8 684 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 BTN2A2Q8WVV5 523 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 GLYATL1Q969I3 302 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms