RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 WDR36Q8NI36 951 aaKnown RBP15.3■□□□□ 0.04
TRA2A-208ENST00000490942 EPS8L3Q8TE67 593 aaKnown RBP15.3■□□□□ 0.04
TRA2A-208ENST00000490942 JPH3Q8WXH2 748 aaPredicted RBP15.3■□□□□ 0.04
TRA2A-208ENST00000490942 SLC41A2Q96JW4 573 aa15.3■□□□□ 0.04
TRA2A-208ENST00000490942 GPR78Q96P69 363 aa15.3■□□□□ 0.04
TRA2A-208ENST00000490942 IL17FQ96PD4 163 aa15.3■□□□□ 0.04
TRA2A-208ENST00000490942 TGM7Q96PF1 710 aa15.3■□□□□ 0.04
TRA2A-208ENST00000490942 OR2A14Q96R47 310 aa15.3■□□□□ 0.04
TRA2A-208ENST00000490942 VPS11Q9H270 941 aa15.3■□□□□ 0.04
TRA2A-208ENST00000490942 IKZF3Q9UKT9 509 aa15.3■□□□□ 0.04
TRA2A-208ENST00000490942 TMCO1Q9UM00 188 aa15.3■□□□□ 0.04
TRA2A-208ENST00000490942 PLAAQ9Y263 795 aa15.3■□□□□ 0.04
TRA2A-208ENST00000490942 BTRCQ9Y297 605 aa15.3■□□□□ 0.04
TRA2A-208ENST00000490942 MSRB2Q9Y3D2 182 aa15.3■□□□□ 0.04
TRA2A-208ENST00000490942 PCDHB11Q9Y5F2 797 aa15.3■□□□□ 0.04
TRA2A-208ENST00000490942 PCDHGA8Q9Y5G5 932 aa15.3■□□□□ 0.04
TRA2A-208ENST00000490942 A0A0J9YY10 115 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 A0A1W2PPV9 198 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 B4E171 279 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 CASC3O15234 703 aaKnown RBP15.29■□□□□ 0.04
TRA2A-208ENST00000490942 MAP3K7O43318 606 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 HYAL3O43820 417 aaPredicted RBP15.29■□□□□ 0.04
TRA2A-208ENST00000490942 IPO13O94829 963 aaKnown RBP15.29■□□□□ 0.04
TRA2A-208ENST00000490942 CCNDBP1O95273 360 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 MT-ND3P03897 115 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 UGT2B7P16662 529 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 NELFEP18615 380 aaKnown RBP15.29■□□□□ 0.04
TRA2A-208ENST00000490942 TFEBP19484 476 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 CSTF2P33240 577 aaKnown RBP eCLIP15.29■□□□□ 0.04
TRA2A-208ENST00000490942 GGT5P36269 586 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 TSPAN7P41732 249 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 SLCO1A2P46721 670 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 RELAQ04206 551 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 DLG1Q12959 904 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 PHF19Q5T6S3 580 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 CACHD1Q5VU97 1274 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 AGTRAPQ6RW13 159 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 BPHLQ86WA6 291 aaPredicted RBP15.29■□□□□ 0.04
TRA2A-208ENST00000490942 GPSM1Q86YR5 675 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 KLHDC8AQ8IYD2 350 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 SYTL1Q8IYJ3 562 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 LSMEM2Q8N112 164 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 PDPRQ8NCN5 879 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 OR2A1Q8NGT9 310 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 OR56A3Q8NH54 315 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 KCTD4Q8WVF5 259 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 PTERQ96BW5 349 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 NXNL1Q96CM4 212 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 ATOH8Q96SQ7 321 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 SGPP1Q9BX95 441 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 CCDC177Q9NQR7 707 aaPredicted RBP15.29■□□□□ 0.04
TRA2A-208ENST00000490942 INTS7Q9NVH2 962 aaKnown RBP15.29■□□□□ 0.04
TRA2A-208ENST00000490942 SPHK1Q9NYA1 384 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 NUDT4Q9NZJ9 180 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 TMEM9Q9P0T7 183 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 ANKMY1Q9P2S6 941 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 TBK1Q9UHD2 729 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 DCDC2Q9UHG0 476 aa15.29■□□□□ 0.04
TRA2A-208ENST00000490942 ISM1B1AKI9 464 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 TARM1B6A8C7 271 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 RASSF9O75901 435 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 H2AFXP16104 143 aaPredicted RBP15.28■□□□□ 0.04
TRA2A-208ENST00000490942 KRT15P19012 456 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 CDH3P22223 829 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 HRH2P25021 359 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 PEBP1P30086 187 aaKnown RBP15.28■□□□□ 0.04
TRA2A-208ENST00000490942 LSSP48449 732 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 HSD11B2P80365 405 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 IRF9Q00978 393 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 FOXK2Q01167 660 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 ZNF844Q08AG5 666 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 CAMK2BQ13554 666 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 OR4D1Q15615 310 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 SULT1C3Q6IMI6 304 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 CAPN13Q6MZZ7 669 aaPredicted RBP15.28■□□□□ 0.04
TRA2A-208ENST00000490942 METTL2BQ6P1Q9 378 aaKnown RBP15.28■□□□□ 0.04
TRA2A-208ENST00000490942 FAM92BQ6ZTR7 304 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 SH2D5Q6ZV89 423 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 SPNS2Q8IVW8 549 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 SPATA6LQ8N4H0 392 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 OR2W6PQ8NHA6 318 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 ZUFSPQ96AP4 578 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 RHBDF1Q96CC6 855 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 MAP3K3Q99759 626 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 MIPEPQ99797 713 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 MRPL57Q9BQC6 102 aaKnown RBP15.28■□□□□ 0.04
TRA2A-208ENST00000490942 SCNM1Q9BWG6 230 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 CNOT10Q9H9A5 744 aaKnown RBP15.28■□□□□ 0.04
TRA2A-208ENST00000490942 UTP6Q9NYH9 597 aaKnown RBP15.28■□□□□ 0.04
TRA2A-208ENST00000490942 SENP1Q9P0U3 644 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 RNF112Q9ULX5 631 aa15.28■□□□□ 0.04
TRA2A-208ENST00000490942 PLD2O14939 933 aa15.27■□□□□ 0.04
TRA2A-208ENST00000490942 KLK8O60259 260 aa15.27■□□□□ 0.04
TRA2A-208ENST00000490942 DXOO77932 396 aaKnown RBP15.27■□□□□ 0.04
TRA2A-208ENST00000490942 CMPK1P30085 196 aa15.27■□□□□ 0.04
TRA2A-208ENST00000490942 RPA3P35244 121 aaPredicted RBP15.27■□□□□ 0.04
TRA2A-208ENST00000490942 CCT5P48643 541 aa15.27■□□□□ 0.04
TRA2A-208ENST00000490942 PPP1CAP62136 330 aa15.27■□□□□ 0.04
TRA2A-208ENST00000490942 TBPL1P62380 186 aa15.27■□□□□ 0.04
TRA2A-208ENST00000490942 PRDX1Q06830 199 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms