RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 SLC16A5O15375 505 aa16.72■□□□□ 0.27
MDC1-206ENST00000489540 EFSO43281 561 aa16.72■□□□□ 0.27
MDC1-206ENST00000489540 C8GP07360 202 aa16.72■□□□□ 0.27
MDC1-206ENST00000489540 CCNYL3P0C7X3 344 aa16.72■□□□□ 0.27
MDC1-206ENST00000489540 ERGP11308 486 aa16.72■□□□□ 0.27
MDC1-206ENST00000489540 ZNF28P17035 718 aa16.72■□□□□ 0.27
MDC1-206ENST00000489540 FDXRP22570 491 aa16.72■□□□□ 0.27
MDC1-206ENST00000489540 GPX6P59796 221 aa16.72■□□□□ 0.27
MDC1-206ENST00000489540 ZIC1Q15915 447 aa16.72■□□□□ 0.27
MDC1-206ENST00000489540 CDHR3Q6ZTQ4 885 aa16.72■□□□□ 0.27
MDC1-206ENST00000489540 UBE2R2Q712K3 238 aaPredicted RBP16.72■□□□□ 0.27
MDC1-206ENST00000489540 VASH2Q86V25 355 aa16.72■□□□□ 0.27
MDC1-206ENST00000489540 TAX1BP1Q86VP1 789 aa16.72■□□□□ 0.27
MDC1-206ENST00000489540 LMNTD1Q8N9Z9 388 aa16.72■□□□□ 0.27
MDC1-206ENST00000489540 ZSCAN1Q8NBB4 408 aa16.72■□□□□ 0.27
MDC1-206ENST00000489540 MCOLN3Q8TDD5 553 aa16.72■□□□□ 0.27
MDC1-206ENST00000489540 N4BP2L2Q92802 583 aaPredicted RBP16.72■□□□□ 0.27
MDC1-206ENST00000489540 ZUFSPQ96AP4 578 aa16.72■□□□□ 0.27
MDC1-206ENST00000489540 KIAA1143Q96AT1 154 aaPredicted RBP16.72■□□□□ 0.27
MDC1-206ENST00000489540 CRELD1Q96HD1 420 aa16.72■□□□□ 0.27
MDC1-206ENST00000489540 RHOJQ9H4E5 214 aa16.72■□□□□ 0.27
MDC1-206ENST00000489540 LRRC4CQ9HCJ2 640 aa16.72■□□□□ 0.27
MDC1-206ENST00000489540 MTRF1LQ9UGC7 380 aaKnown RBP16.72■□□□□ 0.27
MDC1-206ENST00000489540 DMGDHQ9UI17 866 aaKnown RBP16.72■□□□□ 0.27
MDC1-206ENST00000489540 PADI1Q9ULC6 663 aa16.72■□□□□ 0.27
MDC1-206ENST00000489540 FAM159BA6NKW6 160 aa16.71■□□□□ 0.27
MDC1-206ENST00000489540 TARM1B6A8C7 271 aa16.71■□□□□ 0.27
MDC1-206ENST00000489540 TMEM150CB9EJG8 249 aa16.71■□□□□ 0.27
MDC1-206ENST00000489540 SCRG1O75711 98 aa16.71■□□□□ 0.27
MDC1-206ENST00000489540 TIAF1O95411 115 aa16.71■□□□□ 0.27
MDC1-206ENST00000489540 SYF2O95926 243 aaKnown RBP16.71■□□□□ 0.27
MDC1-206ENST00000489540 CYP2A7P20853 494 aa16.71■□□□□ 0.27
MDC1-206ENST00000489540 PNLIPRP1P54315 467 aa16.71■□□□□ 0.27
MDC1-206ENST00000489540 SP140Q13342 867 aa16.71■□□□□ 0.27
MDC1-206ENST00000489540 ARHGAP40Q5TG30 622 aa16.71■□□□□ 0.27
MDC1-206ENST00000489540 TMEM126BQ8IUX1 230 aa16.71■□□□□ 0.27
MDC1-206ENST00000489540 GALNT6Q8NCL4 622 aa16.71■□□□□ 0.27
MDC1-206ENST00000489540 LINGO1Q96FE5 620 aa16.71■□□□□ 0.27
MDC1-206ENST00000489540 VPS39Q96JC1 886 aa16.71■□□□□ 0.27
MDC1-206ENST00000489540 CPNE1Q99829 537 aa16.71■□□□□ 0.27
MDC1-206ENST00000489540 SLC12A9Q9BXP2 914 aa16.71■□□□□ 0.27
MDC1-206ENST00000489540 PARVBQ9HBI1 364 aa16.71■□□□□ 0.27
MDC1-206ENST00000489540 FAM60AQ9NP50 221 aa16.71■□□□□ 0.27
MDC1-206ENST00000489540 SMYD2Q9NRG4 433 aa16.71■□□□□ 0.27
MDC1-206ENST00000489540 PCDHB3Q9Y5E6 796 aa16.71■□□□□ 0.27
MDC1-206ENST00000489540 FAM95CA0A1B0GW59 222 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 A0A1W2PPV9 198 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 KRT87PA6NCN2 255 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 CPNE3O75131 537 aaKnown RBP16.7■□□□□ 0.26
MDC1-206ENST00000489540 SLC16A8O95907 504 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 STX2P32856 288 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 ITGA1P56199 1179 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 FASTKQ14296 549 aaKnown RBP16.7■□□□□ 0.26
MDC1-206ENST00000489540 NAA25Q14CX7 972 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 FIGLAQ6QHK4 219 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 SPNS2Q8IVW8 549 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 DNAJC22Q8N4W6 341 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 OR1L3Q8NH93 324 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 IFT81Q8WYA0 676 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 PDLIM5Q96HC4 596 aaKnown RBP16.7■□□□□ 0.26
MDC1-206ENST00000489540 CCDC138Q96M89 665 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 OLFM1Q99784 485 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 MCMBPQ9BTE3 642 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 GPN2Q9H9Y4 310 aaPredicted RBP16.7■□□□□ 0.26
MDC1-206ENST00000489540 PLCL2Q9UPR0 1127 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 KLK4Q9Y5K2 254 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 LAMA5O15230 3695 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 LOC101059948A0A1B0GTJ6 334 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 TEX51A0A1B0GUA7 166 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 CXorf49A8MYA2 514 aaPredicted RBP16.7■□□□□ 0.26
MDC1-206ENST00000489540 E7EQ34 232 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 TSPAN12O95859 305 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 NTRK1P04629 796 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 HIST1H2AGP0C0S8 130 aaPredicted RBP16.7■□□□□ 0.26
MDC1-206ENST00000489540 HIST1H2ADP20671 130 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 MAGP20916 626 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 SAT1P21673 171 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 RPA3P35244 121 aaPredicted RBP16.7■□□□□ 0.26
MDC1-206ENST00000489540 GP5P40197 560 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 STAT5AP42229 794 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 SLC12A2P55011 1212 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 SRSF6Q13247 344 aaKnown RBP16.7■□□□□ 0.26
MDC1-206ENST00000489540 ZC3H12BQ5HYM0 836 aaKnown RBP16.7■□□□□ 0.26
MDC1-206ENST00000489540 KIAA1614Q5VZ46 1190 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 RELL1Q8IUW5 271 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 CTAGE3PQ8IX95 158 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 FAM20CQ8IXL6 584 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 SYTL1Q8IYJ3 562 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 GPR135Q8IZ08 494 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 NKAPQ8N5F7 415 aaKnown RBP16.7■□□□□ 0.26
MDC1-206ENST00000489540 OR2L3Q8NG85 312 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 OR2A1Q8NGT9 310 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 ZNF480Q8WV37 535 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 HIST1H2AHQ96KK5 128 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 LRFN5Q96NI6 719 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 MIPEPQ99797 713 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 HIST1H2AJQ99878 128 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 H2AFJQ9BTM1 129 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 TRIM54Q9BYV2 358 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 PDE10AQ9Y233 779 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms