RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 EURLQ9NYK6 297 aa8.21□□□□□ -1.1
PRKCB-208ENST00000487674 ERRFI1Q9UJM3 462 aaPredicted RBP8.21□□□□□ -1.1
PRKCB-208ENST00000487674 RIMKLBQ9ULI2 386 aa8.21□□□□□ -1.1
PRKCB-208ENST00000487674 PLAGL1Q9UM63 463 aa8.21□□□□□ -1.1
PRKCB-208ENST00000487674 R3HDM2Q9Y2K5 976 aaKnown RBP8.21□□□□□ -1.1
PRKCB-208ENST00000487674 WIPF3A6NGB9 483 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 OR1I1O60431 355 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 SUN1O94901 812 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 CBX6O95503 412 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 GOT2P00505 430 aaKnown RBP8.2□□□□□ -1.1
PRKCB-208ENST00000487674 LDLRP01130 860 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 PIM1P11309 404 aaPredicted RBP8.2□□□□□ -1.1
PRKCB-208ENST00000487674 ITGAXP20702 1163 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 CD9P21926 228 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 MMP11P24347 488 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 CCR7P32248 378 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 ARSFP54793 590 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 ACVR1Q04771 509 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 AIMP2Q13155 320 aaKnown RBP8.2□□□□□ -1.1
PRKCB-208ENST00000487674 AARS2Q5JTZ9 985 aaKnown RBP8.2□□□□□ -1.1
PRKCB-208ENST00000487674 TSTD2Q5T7W7 516 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 YOD1Q5VVQ6 348 aaPredicted RBP8.2□□□□□ -1.1
PRKCB-208ENST00000487674 UNC5DQ6UXZ4 953 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 RAD9BQ6WBX8 426 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 Q6ZS92 163 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 KIAA1328Q86T90 577 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 ZADH2Q8N4Q0 377 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 TAB3Q8N5C8 712 aaPredicted RBP8.2□□□□□ -1.1
PRKCB-208ENST00000487674 CISD2Q8N5K1 135 aaKnown RBP8.2□□□□□ -1.1
PRKCB-208ENST00000487674 LINC01555Q8NAE3 123 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 ACRBPQ8NEB7 543 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 OR52K1Q8NGK4 314 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 UBE2Q2Q8WVN8 375 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 ASZ1Q8WWH4 475 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 INPP5DQ92835 1189 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 PEX13Q92968 403 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 HDAC10Q969S8 669 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 MRFAP1L1Q96HT8 127 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 RANBP9Q96S59 729 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 WDR77Q9BQA1 342 aaPredicted RBP8.2□□□□□ -1.1
PRKCB-208ENST00000487674 MENTQ9BUN1 341 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 RAB11FIP5Q9BXF6 653 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 SLC26A1Q9H2B4 701 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 MRM3Q9HC36 420 aaKnown RBP8.2□□□□□ -1.1
PRKCB-208ENST00000487674 SLC22A11Q9NSA0 550 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 INTS7Q9NVH2 962 aaKnown RBP8.2□□□□□ -1.1
PRKCB-208ENST00000487674 IMPACTQ9P2X3 320 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 FBXL4Q9UKA2 621 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 NXT1Q9UKK6 140 aaKnown RBP8.2□□□□□ -1.1
PRKCB-208ENST00000487674 AMFRQ9UKV5 643 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 PACSIN2Q9UNF0 486 aaPredicted RBP8.2□□□□□ -1.1
PRKCB-208ENST00000487674 SLC5A6Q9Y289 635 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 POLEQ07864 2286 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 DOCK10Q96BY6 2186 aa8.2□□□□□ -1.1
PRKCB-208ENST00000487674 TCRBV7S2A1N4TA0A589 114 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 ANKUB1A6NFN9 424 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 E7EVH7 732 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 DSCR3O14972 297 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 GPC4O75487 556 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 FKBP9O95302 570 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 ONECUT2O95948 504 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 FTCDO95954 541 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 ALBP02768 609 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 APOA4P06727 396 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 ALAS2P22557 587 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 ADRA1DP25100 572 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 ITGA3P26006 1051 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 STIP1P31948 543 aaKnown RBP8.19□□□□□ -1.1
PRKCB-208ENST00000487674 PPARGP37231 505 aaPredicted RBP8.19□□□□□ -1.1
PRKCB-208ENST00000487674 FDFT1P37268 417 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 ZNF75DP51815 510 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 CSE1LP55060 971 aaKnown RBP8.19□□□□□ -1.1
PRKCB-208ENST00000487674 FOXL2P58012 376 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 PRAMEP78395 509 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 HSPA14Q0VDF9 509 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 ELOAQ14241 798 aaKnown RBP8.19□□□□□ -1.1
PRKCB-208ENST00000487674 GRB7Q14451 532 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 GRM7Q14831 915 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 TMED2Q15363 201 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 FASTKD1Q53R41 847 aaKnown RBP8.19□□□□□ -1.1
PRKCB-208ENST00000487674 ZC3H12BQ5HYM0 836 aaKnown RBP8.19□□□□□ -1.1
PRKCB-208ENST00000487674 CRB2Q5IJ48 1285 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 TCTE1Q5JU00 501 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 IRAK1BP1Q5VVH5 260 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 PRAMEF13Q5VWM6 474 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 PPP1R21Q6ZMI0 780 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 TTLL10Q6ZVT0 673 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 ZNF534Q76KX8 674 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 NLRP9Q7RTR0 991 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 OVCH1Q7RTY7 1134 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 CUZD1Q86UP6 607 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 VRK3Q8IV63 474 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 MCATQ8IVS2 390 aaKnown RBP8.19□□□□□ -1.1
PRKCB-208ENST00000487674 FAM20CQ8IXL6 584 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 TXLNBQ8N3L3 684 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 OR2L8Q8NGY9 312 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 OR4L1Q8NH43 312 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 LKAAEAR1Q8TD35 194 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 PPP4R1Q8TF05 950 aa8.19□□□□□ -1.1
PRKCB-208ENST00000487674 COG1Q8WTW3 980 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms