RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 TBC1D3HP0C7X1 549 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 HTR1EP28566 365 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 IFNGR2P38484 337 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 SLC16A1P53985 500 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 ARF5P84085 180 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 GNA13Q14344 377 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 SLBPQ14493 270 aaKnown RBP eCLIP11.52□□□□□ -0.57
TRA2B-214ENST00000487615 DEPDC1Q5TB30 811 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 TBC1D3GQ6DHY5 549 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 TBC1D3CQ6IPX1 549 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 TSPAN33Q86UF1 283 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 TBC1D3Q8IZP1 549 aaPredicted RBP11.52□□□□□ -0.57
TRA2B-214ENST00000487615 GOLM1Q8NBJ4 401 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 HHIPL1Q96JK4 782 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 INTS7Q9NVH2 962 aaKnown RBP11.52□□□□□ -0.57
TRA2B-214ENST00000487615 MSRAQ9UJ68 235 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 SLC9A8Q9Y2E8 581 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 FER1L6Q2WGJ9 1857 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 PPP6CO00743 305 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 NME4O00746 187 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 ADAMDEC1O15204 470 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 SMAD6O43541 496 aaKnown RBP11.52□□□□□ -0.57
TRA2B-214ENST00000487615 HTR1BP28222 390 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 HTR6P50406 440 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 LSM3P62310 102 aaKnown RBP11.52□□□□□ -0.57
TRA2B-214ENST00000487615 PCBP2Q15366 365 aaKnown RBP eCLIP11.52□□□□□ -0.57
TRA2B-214ENST00000487615 HKDC1Q2TB90 917 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 TIMM50Q3ZCQ8 353 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 OGFOD2Q6N063 350 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 ZFAND4Q86XD8 727 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 CYP4Z2PQ8N1L4 340 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 OR8J3Q8NGG0 315 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 SMIM14Q96QK8 99 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 TRIT1Q9H3H1 467 aaKnown RBP11.52□□□□□ -0.57
TRA2B-214ENST00000487615 RERGLQ9H628 205 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 RASSF1Q9NS23 344 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 HSFX1Q9UBD0 423 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 IDSP22304 550 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 KELP23276 732 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 RPS3P23396 243 aaKnown RBP eCLIP11.51□□□□□ -0.57
TRA2B-214ENST00000487615 SPIN4Q56A73 249 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 KIAA1324Q6UXG2 1013 aaKnown RBP11.51□□□□□ -0.57
TRA2B-214ENST00000487615 MBOAT1Q6ZNC8 495 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 ZBTB46Q86UZ6 589 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 COL26A1Q96A83 441 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 AASDHPPTQ9NRN7 309 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 GULP1Q9UBP9 304 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 SLC27A6Q9Y2P4 619 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 TNFRSF11BO00300 401 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 OR10H3O60404 316 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 CREG1O75629 220 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 LINGO3P0C6S8 592 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 CTSAP10619 480 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 SRCP12931 536 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 ENGP17813 658 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 BDKRB1P46663 353 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 CDH15P55291 814 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 TRAF3Q13114 568 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 KCTD8Q6ZWB6 473 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 USP7Q93009 1102 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 NODALQ96S42 347 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 C6orf62Q9GZU0 229 aaPredicted RBP11.51□□□□□ -0.57
TRA2B-214ENST00000487615 SLC28A2O43868 658 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 GPX3P22352 226 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 TLX1P31314 330 aaPredicted RBP11.51□□□□□ -0.57
TRA2B-214ENST00000487615 PREPP48147 710 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 CDK9P50750 372 aaKnown RBP11.51□□□□□ -0.57
TRA2B-214ENST00000487615 RPS6KA3P51812 740 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 HEPACAMQ14CZ8 416 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 CCDC85BQ15834 202 aaPredicted RBP11.51□□□□□ -0.57
TRA2B-214ENST00000487615 RFTN2Q52LD8 501 aaPredicted RBP11.51□□□□□ -0.57
TRA2B-214ENST00000487615 TMEM173Q86WV6 379 aaPredicted RBP11.51□□□□□ -0.57
TRA2B-214ENST00000487615 C3orf30Q96M34 536 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 SLC7A5P2Q9GIP4 190 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 CLN6Q9NWW5 311 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 SHROOM3Q8TF72 1996 aa11.51□□□□□ -0.57
TRA2B-214ENST00000487615 DFNA5O60443 496 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 CCNDBP1O95273 360 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 ETV3P41162 512 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 KCNC3Q14003 757 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 DUOXA1Q1HG43 343 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 ZNF805Q5CZA5 627 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 LCN8Q6JVE9 175 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 LETMD1Q6P1Q0 360 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 CRTC1Q6UUV9 634 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 MMAAQ8IVH4 418 aaKnown RBP11.5□□□□□ -0.57
TRA2B-214ENST00000487615 BPIFB1Q8TDL5 484 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 YTHDF1Q9BYJ9 559 aaKnown RBP11.5□□□□□ -0.57
TRA2B-214ENST00000487615 REXO4Q9GZR2 422 aaKnown RBP11.5□□□□□ -0.57
TRA2B-214ENST00000487615 CERS4Q9HA82 394 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 FANCEQ9HB96 536 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 FAM120CQ9NX05 1096 aaKnown RBP11.5□□□□□ -0.57
TRA2B-214ENST00000487615 LOC100506127A0A0U1RQW1 187 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 H0YJX3 145 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 DENRO43583 198 aaKnown RBP11.5□□□□□ -0.57
TRA2B-214ENST00000487615 CACNG3O60359 315 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 RSL1D1O76021 490 aaKnown RBP11.5□□□□□ -0.57
TRA2B-214ENST00000487615 TGFB1P01137 390 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 KLKB1P03952 638 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 MPC1LP0DKB6 136 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms