RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 KDM5BQ9UGL1 1544 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 ADAM20O43506 726 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 ERAL1O75616 437 aaKnown RBP3.62□□□□□ -1.83
LINC00888-204ENST00000487386 HSPA8P11142 646 aaKnown RBP3.62□□□□□ -1.83
LINC00888-204ENST00000487386 DNASE1P24855 282 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 MAZP56270 477 aaKnown RBP3.62□□□□□ -1.83
LINC00888-204ENST00000487386 SP3Q02447 781 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 SYT14P1Q58G82 188 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 XKR3Q5GH77 459 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 ELFN2Q5R3F8 820 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 MYPOPQ86VE0 399 aaPredicted RBP3.62□□□□□ -1.83
LINC00888-204ENST00000487386 CFAP206Q8IYR0 622 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 LSMEM2Q8N112 164 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 TMEM178AQ8NBL3 297 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 KBTBD8Q8NFY9 601 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 OR52N5Q8NH56 324 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 CCDC107Q8WV48 283 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 SSMEM1Q8WWF3 244 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 SLAMF9Q96A28 289 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 SPDL1Q96EA4 605 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 RAD9AQ99638 391 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 PITPNM3Q9BZ71 974 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 CPVLQ9H3G5 476 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 GOLPH3LQ9H4A5 285 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 OPA3Q9H6K4 179 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 PRMT7Q9NVM4 692 aaPredicted RBP3.62□□□□□ -1.83
LINC00888-204ENST00000487386 SPHK1Q9NYA1 384 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 CACNG4Q9UBN1 327 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 DAPK2Q9UIK4 370 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 DIP2BQ9P265 1576 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 CCNB3Q8WWL7 1395 aa3.62□□□□□ -1.83
LINC00888-204ENST00000487386 CDC42BPBQ9Y5S2 1711 aa3.61□□□□□ -1.83
LINC00888-204ENST00000487386 PLXNC1O60486 1568 aa3.61□□□□□ -1.83
LINC00888-204ENST00000487386 A0A1W2PPQ1 181 aa3.61□□□□□ -1.83
LINC00888-204ENST00000487386 ANKRD61A6NGH8 418 aa3.61□□□□□ -1.83
LINC00888-204ENST00000487386 LINGO3P0C6S8 592 aa3.61□□□□□ -1.83
LINC00888-204ENST00000487386 PFKFB1P16118 471 aa3.61□□□□□ -1.83
LINC00888-204ENST00000487386 NNMTP40261 264 aa3.61□□□□□ -1.83
LINC00888-204ENST00000487386 SNRPD1P62314 119 aaKnown RBP3.61□□□□□ -1.83
LINC00888-204ENST00000487386 LMOD3Q0VAK6 560 aa3.61□□□□□ -1.83
LINC00888-204ENST00000487386 RRS1Q15050 365 aaKnown RBP3.61□□□□□ -1.83
LINC00888-204ENST00000487386 SNAPC1Q16533 368 aa3.61□□□□□ -1.83
LINC00888-204ENST00000487386 CA9Q16790 459 aa3.61□□□□□ -1.83
LINC00888-204ENST00000487386 PDLIM3Q53GG5 364 aaPredicted RBP3.61□□□□□ -1.83
LINC00888-204ENST00000487386 C20orf194Q5TEA3 1177 aa3.61□□□□□ -1.83
LINC00888-204ENST00000487386 Q6ZSR9 355 aa3.61□□□□□ -1.83
LINC00888-204ENST00000487386 TSPAN14Q8NG11 270 aa3.61□□□□□ -1.83
LINC00888-204ENST00000487386 OR11H4Q8NGC9 324 aa3.61□□□□□ -1.83
LINC00888-204ENST00000487386 OR2T6Q8NHC8 308 aa3.61□□□□□ -1.83
LINC00888-204ENST00000487386 SUSD6Q92537 303 aa3.61□□□□□ -1.83
LINC00888-204ENST00000487386 PTERQ96BW5 349 aa3.61□□□□□ -1.83
LINC00888-204ENST00000487386 ZNF830Q96NB3 372 aaPredicted RBP3.61□□□□□ -1.83
LINC00888-204ENST00000487386 DGAT2Q96PD7 388 aa3.61□□□□□ -1.83
LINC00888-204ENST00000487386 NUP85Q9BW27 656 aa3.61□□□□□ -1.83
LINC00888-204ENST00000487386 GPR88Q9GZN0 384 aa3.61□□□□□ -1.83
LINC00888-204ENST00000487386 OLAHQ9NV23 265 aa3.61□□□□□ -1.83
LINC00888-204ENST00000487386 DPP3Q9NY33 737 aa3.61□□□□□ -1.83
LINC00888-204ENST00000487386 ASIC3Q9UHC3 531 aa3.61□□□□□ -1.83
LINC00888-204ENST00000487386 CHORDC1Q9UHD1 332 aaPredicted RBP3.61□□□□□ -1.83
LINC00888-204ENST00000487386 RPS6KA6Q9UK32 745 aa3.61□□□□□ -1.83
LINC00888-204ENST00000487386 EXOGQ9Y2C4 368 aaKnown RBP3.61□□□□□ -1.83
LINC00888-204ENST00000487386 ATP10BO94823 1461 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 ABCC10Q5T3U5 1492 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 SHANK2Q9UPX8 1470 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 ZFYVE16Q7Z3T8 1539 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 INO80Q9ULG1 1556 aaPredicted RBP3.6□□□□□ -1.83
LINC00888-204ENST00000487386 MAP3K4Q9Y6R4 1608 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 A0A1W2PPM1 405 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 K7ENM7 598 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 EXTL3O43909 919 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 IGHV2-70P01814 119 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 SMIM18P0DKX4 95 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 KRT5P13647 590 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 TYMPP19971 482 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 IFI35P80217 286 aaPredicted RBP3.6□□□□□ -1.83
LINC00888-204ENST00000487386 ZNF415Q09FC8 603 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 HSPB3Q12988 150 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 RALBP1Q15311 655 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 XKR6Q5GH73 641 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 FAAP20Q6NZ36 180 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 KIRREL3Q8IZU9 778 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 EID3Q8N140 333 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 ZNF614Q8N883 585 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 OR5AP2Q8NGF4 316 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 MOCOSQ96EN8 888 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 SHARPINQ9H0F6 387 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 HAO2Q9NYQ3 351 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 MORF4L1Q9UBU8 362 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 IL17BQ9UHF5 180 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 FBXO2Q9UK22 296 aaPredicted RBP3.6□□□□□ -1.83
LINC00888-204ENST00000487386 GRID1Q9ULK0 1009 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 ABT1Q9ULW3 272 aaKnown RBP3.6□□□□□ -1.83
LINC00888-204ENST00000487386 PPIEQ9UNP9 301 aaKnown RBP3.6□□□□□ -1.83
LINC00888-204ENST00000487386 CCDC141Q6ZP82 1450 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 ARAP3Q8WWN8 1544 aa3.6□□□□□ -1.83
LINC00888-204ENST00000487386 ARHGEF5Q12774 1597 aa3.59□□□□□ -1.83
LINC00888-204ENST00000487386 HECW2Q9P2P5 1572 aa3.59□□□□□ -1.83
LINC00888-204ENST00000487386 TCRBV21S2A2A0A5A6 115 aa3.59□□□□□ -1.83
LINC00888-204ENST00000487386 NDUFAF8A1L188 74 aa3.59□□□□□ -1.83
LINC00888-204ENST00000487386 ANTXRLA6NF34 631 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms