RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 CKAP4Q07065 602 aaKnown RBP11.13□□□□□ -0.63
TRIM56-204ENST00000487252 SLC18A3Q16572 532 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 SPESP1Q6UW49 350 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 TMCO3Q6UWJ1 677 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 ADGRF3Q8IZF5 1079 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 DNAJC22Q8N4W6 341 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 BEND7Q8N7W2 519 aaPredicted RBP11.13□□□□□ -0.63
TRIM56-204ENST00000487252 ARMC2Q8NEN0 867 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 ARRDC2Q8TBH0 407 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 BRSK1Q8TDC3 778 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 LCN9Q8WX39 176 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.13□□□□□ -0.63
TRIM56-204ENST00000487252 PWWP2AQ96N64 755 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 KCTD15Q96SI1 283 aaPredicted RBP11.13□□□□□ -0.63
TRIM56-204ENST00000487252 NRTNQ99748 197 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 C11orf70Q9BRQ4 267 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 CNPY3Q9BT09 278 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 POLR1EQ9GZS1 481 aaKnown RBP11.13□□□□□ -0.63
TRIM56-204ENST00000487252 NT5MQ9NPB1 228 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 NLRC4Q9NPP4 1024 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 DMRT3Q9NQL9 472 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 RAD18Q9NS91 495 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 DUSP10Q9Y6W6 482 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 COLEC10Q9Y6Z7 277 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 SNRNP200O75643 2136 aaKnown RBP11.12□□□□□ -0.63
TRIM56-204ENST00000487252 IGHV1-45A0A0A0MS14 117 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 C2orf74A8MZ97 194 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 DAPK3O43293 454 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 ARHGEF9O43307 516 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 WFS1O76024 890 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 GFPT2O94808 682 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 ITGAMP11215 1152 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 ALAS2P22557 587 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 CES1P23141 567 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 KIR2DL3P43628 341 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 ARSFP54793 590 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 KLC1Q07866 573 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 DAZAP2Q15038 168 aaPredicted RBP11.12□□□□□ -0.63
TRIM56-204ENST00000487252 RNFT1Q5M7Z0 435 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 Q5PR19 223 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 ABHD17BQ5VST6 288 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 TTLL10Q6ZVT0 673 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 TMC3Q7Z5M5 1100 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 CD163Q86VB7 1156 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 KRT222Q8N1A0 295 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 RPRMLQ8N4K4 120 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 RASGEF1AQ8N9B8 481 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 SLC30A5Q8TAD4 765 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.12□□□□□ -0.63
TRIM56-204ENST00000487252 DLG3Q92796 817 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 RMDN2Q96LZ7 410 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 SIGLEC12Q96PQ1 595 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 CRB3Q9BUF7 120 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 MENTQ9BUN1 341 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 BDH2Q9BUT1 245 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 HES7Q9BYE0 225 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 DEF6Q9H4E7 631 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 TFB2MQ9H5Q4 396 aaKnown RBP11.12□□□□□ -0.63
TRIM56-204ENST00000487252 DHX35Q9H5Z1 703 aaKnown RBP11.12□□□□□ -0.63
TRIM56-204ENST00000487252 LUC7LQ9NQ29 371 aaKnown RBP11.12□□□□□ -0.63
TRIM56-204ENST00000487252 CRIM1Q9NZV1 1036 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 CWC15Q9P013 229 aaKnown RBP11.12□□□□□ -0.63
TRIM56-204ENST00000487252 ACSL5Q9ULC5 683 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 CBLCQ9ULV8 474 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 SNX12Q9UMY4 172 aa11.12□□□□□ -0.63
TRIM56-204ENST00000487252 MACROD2A1Z1Q3 448 aa11.11□□□□□ -0.63
TRIM56-204ENST00000487252 DSCR3O14972 297 aa11.11□□□□□ -0.63
TRIM56-204ENST00000487252 RAB28P51157 221 aa11.11□□□□□ -0.63
TRIM56-204ENST00000487252 RPL7AP62424 266 aaKnown RBP11.11□□□□□ -0.63
TRIM56-204ENST00000487252 DSC2Q02487 901 aa11.11□□□□□ -0.63
TRIM56-204ENST00000487252 KLHL30Q0D2K2 578 aa11.11□□□□□ -0.63
TRIM56-204ENST00000487252 GTF2H3Q13889 308 aa11.11□□□□□ -0.63
TRIM56-204ENST00000487252 PCBP2Q15366 365 aaKnown RBP eCLIP11.11□□□□□ -0.63
TRIM56-204ENST00000487252 ATP13A5Q4VNC0 1218 aa11.11□□□□□ -0.63
TRIM56-204ENST00000487252 ERMARDQ5T6L9 678 aa11.11□□□□□ -0.63
TRIM56-204ENST00000487252 WDR93Q6P2C0 686 aa11.11□□□□□ -0.63
TRIM56-204ENST00000487252 PRSS57Q6UWY2 283 aa11.11□□□□□ -0.63
TRIM56-204ENST00000487252 CAPN12Q6ZSI9 719 aa11.11□□□□□ -0.63
TRIM56-204ENST00000487252 CYP4V2Q6ZWL3 525 aaPredicted RBP11.11□□□□□ -0.63
TRIM56-204ENST00000487252 LRRC75A-AS1Q8N1F1 130 aa11.11□□□□□ -0.63
TRIM56-204ENST00000487252 FLVCR1-AS1Q8TAF5 88 aa11.11□□□□□ -0.63
TRIM56-204ENST00000487252 DENND1AQ8TEH3 1009 aa11.11□□□□□ -0.63
TRIM56-204ENST00000487252 ALS2CR12Q96Q35 445 aa11.11□□□□□ -0.63
TRIM56-204ENST00000487252 SARGQ9BW04 601 aa11.11□□□□□ -0.63
TRIM56-204ENST00000487252 TAS2R14Q9NYV8 317 aa11.11□□□□□ -0.63
TRIM56-204ENST00000487252 ACTR10Q9NZ32 417 aa11.11□□□□□ -0.63
TRIM56-204ENST00000487252 PLCL2Q9UPR0 1127 aa11.11□□□□□ -0.63
TRIM56-204ENST00000487252 CAPN6Q9Y6Q1 641 aa11.11□□□□□ -0.63
TRIM56-204ENST00000487252 A0A087X0T9 212 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 SMAD7O15105 426 aaKnown RBP11.1□□□□□ -0.63
TRIM56-204ENST00000487252 KCNAB3O43448 404 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 PRPSAP2O60256 369 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 IFNA2P01563 188 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 FAM228BP0C875 321 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 FERP16591 822 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 CHRNB2P17787 502 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 CA4P22748 312 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 EEF1DP29692 281 aaKnown RBP11.1□□□□□ -0.63
TRIM56-204ENST00000487252 PTGS2P35354 604 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 PEX19P40855 299 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms