RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-205	ENST00000486941	PKP1	Q13835	747 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	ELAVL3	Q14576	367 aa	Known RBP	4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	SMTNL2	Q2TAL5	461 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	CBWD6	Q4V339	395 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	COBLL1	Q53SF7	1204 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	DCAF6	Q58WW2	860 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	ZNF628	Q5EBL2	1059 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	FSCB	Q5H9T9	825 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	MS4A13	Q5J8X5	152 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	CBWD3	Q5JTY5	395 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	CBWD5	Q5RIA9	395 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	HES3	Q5TGS1	186 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	FAM46C	Q5VWP2	391 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	FAM90A2P	Q658T7	463 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	TBC1D3G	Q6DHY5	549 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	TBC1D3C	Q6IPX1	549 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	NAPEPLD	Q6IQ20	393 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	TMEM270	Q6UE05	265 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	KYAT3	Q6YP21	454 aa	Known RBP	4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	B4GALNT4	Q76KP1	1039 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	TRIM69	Q86WT6	500 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	TBC1D3	Q8IZP1	549 aa	Predicted RBP	4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	APCDD1	Q8J025	514 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	FSTL5	Q8N475	847 aa	Predicted RBP	4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	CARNMT1	Q8N4J0	409 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	AADAT	Q8N5Z0	425 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	FAM156A	Q8NDB6	213 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	DQX1	Q8TE96	717 aa	Known RBP	4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	SLC35C1	Q96A29	364 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	FAM131C	Q96AQ9	280 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	SLC39A13	Q96H72	371 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	CCDC34	Q96HJ3	373 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	SERPINB11	Q96P15	392 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	WDR24	Q96S15	920 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	TSG101	Q99816	390 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	TRIM62	Q9BVG3	475 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	CINP	Q9BW66	212 aa	Predicted RBP	4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	THSD1	Q9NS62	852 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	DECR2	Q9NUI1	292 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	TBC1D23	Q9NUY8	699 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	ASNSD1	Q9NWL6	643 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	ARMCX3	Q9UH62	379 aa	Predicted RBP	4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	CYTH4	Q9UIA0	394 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	ICK	Q9UPZ9	632 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	CEP83	Q9Y592	693 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	RAI2	Q9Y5P3	530 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	MAST4	O15021	2626 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941	PIEZO2	Q9H5I5	2752 aa		4.02	□□□□□ -1.77
SNRNP40-205	ENST00000486941		A0A087WYN8	130 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	PRAMEF26	H0Y7S4	382 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941		M0QYV0	167 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	MCF2L	O15068	1137 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	ALOX15B	O15296	676 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	P4HA2	O15460	535 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	PLRG1	O43660	514 aa	Known RBP	4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	TRUB2	O95900	331 aa	Known RBP	4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	IL1B	P01584	269 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	IGLV3-25	P01717	112 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	APOE	P02649	317 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	PRB1	P04280	392 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	SLC2A3	P11169	496 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	DRD3	P35462	400 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	PRCP	P42785	496 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	GPD2	P43304	727 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	ACADSB	P45954	432 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	PSMD8	P48556	350 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	FMO5	P49326	533 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	CLDN6	P56747	220 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	YWHAZ	P63104	245 aa	Known RBP	4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	NUCB2	P80303	420 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	GCNT1	Q02742	428 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	LRRC63	Q05C16	580 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	CETN1	Q12798	172 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	LRMP	Q12912	555 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	EIF4EBP2	Q13542	120 aa	Predicted RBP	4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	GALE	Q14376	348 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	PTGR1	Q14914	329 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	MEA1	Q16626	185 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	SETMAR	Q53H47	684 aa	Predicted RBP	4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	PIK3CD-AS1	Q5SR53	167 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	ZNF658	Q5TYW1	1059 aa	Predicted RBP	4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	RNF220	Q5VTB9	566 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	SYPL2	Q5VXT5	272 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	ANKRD40	Q6AI12	368 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	ZNF324B	Q6AW86	544 aa	Predicted RBP	4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	NEK5	Q6P3R8	708 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	MMS22L	Q6ZRQ5	1243 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	DSG4	Q86SJ6	1040 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	TMEM110	Q86TL2	294 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	P3H2	Q8IVL5	708 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	HSCB	Q8IWL3	235 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	LGI2	Q8N0V4	545 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	LSMEM2	Q8N112	164 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	STK40	Q8N2I9	435 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	SLC25A45	Q8N413	288 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	ATP6V0D2	Q8N8Y2	350 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	LMO3	Q8TAP4	145 aa		4.01	□□□□□ -1.77

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