RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 ZNF449Q6P9G9 518 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 MFSD6Q6ZSS7 791 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 FOXL2NBQ6ZUU3 175 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 CCDC91Q7Z6B0 441 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 PHLDB2Q86SQ0 1253 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 C4orf19Q8IY42 314 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 CDK20Q8IZL9 346 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 LMNTD1Q8N9Z9 388 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 NPEPL1Q8NDH3 523 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 MR1Q95460 341 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 INTS14Q96SY0 518 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 TUBB2BQ9BVA1 445 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 SDF2L1Q9HCN8 221 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 FAM118AQ9NWS6 357 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 LRWD1Q9UFC0 647 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 MTUS1Q9ULD2 1270 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 IFIT3O14879 490 aaKnown RBP4.23□□□□□ -1.73
SMC4-218ENST00000486711 RPS6KA5O75582 802 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 PGLSO95336 258 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 CAVIN2O95810 425 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 ZFYP08048 801 aaPredicted RBP4.23□□□□□ -1.73
SMC4-218ENST00000486711 FAM58BPP0C7Q3 252 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 FGF5P12034 268 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 EPCAMP16422 314 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 ADRA2CP18825 462 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 UBASH3AP57075 661 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 DMP1Q13316 513 aaPredicted RBP4.23□□□□□ -1.73
SMC4-218ENST00000486711 ITGA7Q13683 1181 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 ODF4Q2M2E3 257 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 NHSL2Q5HYW2 709 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 SPOUT1Q5T280 376 aaKnown RBP4.23□□□□□ -1.73
SMC4-218ENST00000486711 GDPD4Q6W3E5 623 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 NFE4Q86UQ8 179 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 PLD3Q8IV08 490 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 DCUN1D3Q8IWE4 304 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 DNAJC22Q8N4W6 341 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 OR1J1Q8NGS3 322 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 VANGL1Q8TAA9 524 aaPredicted RBP4.23□□□□□ -1.73
SMC4-218ENST00000486711 FGFBP3Q8TAT2 258 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 NSMAFQ92636 917 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 PROX1Q92786 737 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 ST6GAL2Q96JF0 529 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 RSPH9Q9H1X1 276 aaPredicted RBP4.23□□□□□ -1.73
SMC4-218ENST00000486711 S1PR5Q9H228 398 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 TFB2MQ9H5Q4 396 aaKnown RBP4.23□□□□□ -1.73
SMC4-218ENST00000486711 ERAP1Q9NZ08 941 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 COQ3Q9NZJ6 369 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 CACNG4Q9UBN1 327 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 DNAJB9Q9UBS3 223 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 ARMCX3Q9UH62 379 aaPredicted RBP4.23□□□□□ -1.73
SMC4-218ENST00000486711 ZDHHC2Q9UIJ5 367 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 TMED3Q9Y3Q3 217 aa4.23□□□□□ -1.73
SMC4-218ENST00000486711 A0A1W2PPW3 197 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 ANKRD61A6NGH8 418 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 PI4K2BG5E9Z4 385 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 H0YAE9 185 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 PLOD2O00469 737 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 SLC7A4O43246 635 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 MSH3P20585 1137 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 TCF7P36402 384 aaPredicted RBP4.22□□□□□ -1.73
SMC4-218ENST00000486711 WNT5AP41221 380 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 ALDH3A2P51648 485 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 RBM39Q14498 530 aaKnown RBP4.22□□□□□ -1.73
SMC4-218ENST00000486711 RRS1Q15050 365 aaKnown RBP4.22□□□□□ -1.73
SMC4-218ENST00000486711 NPTX1Q15818 432 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 CA9Q16790 459 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 FAM174BQ3ZCQ3 159 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 ODF2Q5BJF6 829 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 CCNYL2Q5T2Q4 361 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 TMEM139Q8IV31 216 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 FAM219AQ8IW50 185 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 NDUFAF2Q8N183 169 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 SLC24A4Q8NFF2 622 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 OR4K1Q8NGD4 311 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 GRAPLQ8TC17 118 aaPredicted RBP4.22□□□□□ -1.73
SMC4-218ENST00000486711 HEXDCQ8WVB3 486 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 CORO2AQ92828 525 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 EXOC4Q96A65 974 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 SPATA33Q96N06 139 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 RAD9AQ99638 391 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 GPATCH1Q9BRR8 931 aaKnown RBP4.22□□□□□ -1.73
SMC4-218ENST00000486711 URM1Q9BTM9 101 aaKnown RBP4.22□□□□□ -1.73
SMC4-218ENST00000486711 MLPHQ9BV36 600 aaPredicted RBP4.22□□□□□ -1.73
SMC4-218ENST00000486711 SNX25Q9H3E2 840 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 TAAR2Q9P1P5 351 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 DAPK2Q9UIK4 370 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 ITGA11Q9UKX5 1188 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 KCNK7Q9Y2U2 307 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 TRIM17Q9Y577 477 aa4.22□□□□□ -1.73
SMC4-218ENST00000486711 A0A1W2PN81 502 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 FAM86B1E9PN63 330 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 PRKNO60260 465 aaPredicted RBP4.21□□□□□ -1.74
SMC4-218ENST00000486711 LMX1BO60663 402 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 PRKRAO75569 313 aaKnown RBP4.21□□□□□ -1.74
SMC4-218ENST00000486711 PIGNO95427 931 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 FAM86B2P0C5J1 330 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 SUPT20HL2P0C7V6 817 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 SPP1P10451 314 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 CHRNA7P36544 502 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 RGS7P49802 495 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms