RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 PNPLA1Q8N8W4 532 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 PHF10Q8WUB8 498 aaKnown RBP10.78□□□□□ -0.68
HDAC6-228ENST00000486227 ZNF514Q96K75 400 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-228ENST00000486227 KCNA7Q96RP8 456 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 SLC39A3Q9BRY0 314 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 TRIT1Q9H3H1 467 aaKnown RBP10.78□□□□□ -0.68
HDAC6-228ENST00000486227 EXO5Q9H790 373 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 GIMAP2Q9UG22 337 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 EDDM13A0A1B0GTR0 161 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 BHMG1C9JSJ3 638 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-228ENST00000486227 H0YJX3 145 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 EI24O14681 340 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 CA3P07451 260 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 SLC35E2BP0CK96 405 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 HLA-EP13747 358 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 GGT5P36269 586 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 MTPNP58546 118 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 C16orf62Q7Z3J2 963 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 CYP2U1Q7Z449 544 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 P2RY8Q86VZ1 359 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 CEP97Q8IW35 865 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 SLC13A3Q8WWT9 602 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 MYDGFQ969H8 173 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 DERL2Q9GZP9 239 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 FBRSL1Q9HCM7 1045 aaKnown RBP10.78□□□□□ -0.68
HDAC6-228ENST00000486227 ZNF232Q9UNY5 417 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 UPK3BL1B0FP48 263 aa10.77□□□□□ -0.68
HDAC6-228ENST00000486227 UPK3BL2E5RIL1 263 aa10.77□□□□□ -0.68
HDAC6-228ENST00000486227 E7ENX8 843 aa10.77□□□□□ -0.68
HDAC6-228ENST00000486227 PRR23D1E9PI22 279 aaPredicted RBP10.77□□□□□ -0.68
HDAC6-228ENST00000486227 FBP2O00757 339 aa10.77□□□□□ -0.68
HDAC6-228ENST00000486227 PGLSO95336 258 aa10.77□□□□□ -0.68
HDAC6-228ENST00000486227 PRR23D2P0DMB1 279 aaPredicted RBP10.77□□□□□ -0.68
HDAC6-228ENST00000486227 LEPRP48357 1165 aaKnown RBP10.77□□□□□ -0.68
HDAC6-228ENST00000486227 NFKB2Q00653 900 aa10.77□□□□□ -0.68
HDAC6-228ENST00000486227 AMZ2Q86W34 360 aa10.77□□□□□ -0.68
HDAC6-228ENST00000486227 CANT1Q8WVQ1 401 aa10.77□□□□□ -0.68
HDAC6-228ENST00000486227 NUS1Q96E22 293 aa10.77□□□□□ -0.68
HDAC6-228ENST00000486227 SESN1Q9Y6P5 492 aa10.77□□□□□ -0.68
HDAC6-228ENST00000486227 ARAP2Q8WZ64 1704 aa10.77□□□□□ -0.68
HDAC6-228ENST00000486227 HTRA2O43464 458 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-228ENST00000486227 RFPL2O75678 378 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 DHRS4L1P0CG22 281 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 ZNF37AP17032 561 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-228ENST00000486227 DNAJB1P25685 340 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 NOS3P29474 1203 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 VIPR1P32241 457 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 FCHO2Q0JRZ9 810 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 TAB1Q15750 504 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 DPY19L3Q6ZPD9 716 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 SRFBP1Q8NEF9 429 aaKnown RBP10.77□□□□□ -0.69
HDAC6-228ENST00000486227 RBM4BQ9BQ04 359 aaKnown RBP10.77□□□□□ -0.69
HDAC6-228ENST00000486227 RBM4Q9BWF3 364 aaKnown RBP10.77□□□□□ -0.69
HDAC6-228ENST00000486227 TTLL2Q9BWV7 592 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 TDRD1Q9BXT4 1180 aaKnown RBP10.77□□□□□ -0.69
HDAC6-228ENST00000486227 SLCO3A1Q9UIG8 710 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 SLC22A14Q9Y267 594 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 DOCK2Q92608 1830 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 CLPXO76031 633 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 S1PR4O95977 384 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 ATP1B2P14415 290 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-228ENST00000486227 NR4A1P22736 598 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 GPRC6AQ5T6X5 926 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 RANBP10Q6VN20 620 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 KCNJ9Q92806 393 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 FBXL12Q9NXK8 326 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 IFT80Q9P2H3 777 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-228ENST00000486227 GMEB2Q9UKD1 530 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 CARD8Q9Y2G2 431 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 BCORQ6W2J9 1755 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 TULP3O75386 442 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 CYP4B1P13584 511 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 ACTR1BP42025 376 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 SEPHS1P49903 392 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 ACTR1AP61163 376 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 SPIBQ01892 262 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 TGFBIQ15582 683 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 C9orf64Q5T6V5 341 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 TMEM53Q6P2H8 277 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 ERMP1Q7Z2K6 904 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 CYP4Z2PQ8N1L4 340 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 XAGE5Q8WWM1 108 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 SCAMP4Q969E2 229 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 EXOSC8Q96B26 276 aaKnown RBP10.77□□□□□ -0.69
HDAC6-228ENST00000486227 VPS35Q96QK1 796 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 ZSCAN5AQ9BUG6 496 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 WDR26Q9H7D7 661 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 ADAM30Q9UKF2 790 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 ACTL7AQ9Y615 435 aa10.77□□□□□ -0.69
HDAC6-228ENST00000486227 ZCWPW2A0A1B0GU75 182 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 H3BNH8 94 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 PI15O43692 258 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 OR1F1O43749 312 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 SLC28A2O43868 658 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 MMP20O60882 483 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 ITGA2P17301 1181 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 ATP13A5Q4VNC0 1218 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 USP39Q53GS9 565 aaKnown RBP10.76□□□□□ -0.69
HDAC6-228ENST00000486227 KIAA0319Q5VV43 1072 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 TAS1R1Q7RTX1 841 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms