RNA–Protein interactions for RNA: ENST00000486144.1

SERF2-216, Transcript of small EDRK-rich factor 2, human

TSL 2

Gene SERF2, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SERF2-216	ENST00000486144	LINC01555	Q8NAE3	123 aa		11.77	□□□□□ -0.53
SERF2-216	ENST00000486144	FLVCR1-AS1	Q8TAF5	88 aa		11.77	□□□□□ -0.53
SERF2-216	ENST00000486144	SKA2	Q8WVK7	121 aa	Predicted RBP	11.77	□□□□□ -0.53
SERF2-216	ENST00000486144	KLHL6	Q8WZ60	621 aa		11.77	□□□□□ -0.53
SERF2-216	ENST00000486144	RNF31	Q96EP0	1072 aa		11.77	□□□□□ -0.53
SERF2-216	ENST00000486144	ZDHHC12	Q96GR4	267 aa		11.77	□□□□□ -0.53
SERF2-216	ENST00000486144	OLFM1	Q99784	485 aa		11.77	□□□□□ -0.53
SERF2-216	ENST00000486144	MCMBP	Q9BTE3	642 aa		11.77	□□□□□ -0.53
SERF2-216	ENST00000486144	SLC25A18	Q9H1K4	315 aa		11.77	□□□□□ -0.53
SERF2-216	ENST00000486144	CCDC68	Q9H2F9	335 aa		11.77	□□□□□ -0.53
SERF2-216	ENST00000486144	ZNF768	Q9H5H4	540 aa	Known RBP	11.77	□□□□□ -0.53
SERF2-216	ENST00000486144	LRRC4C	Q9HCJ2	640 aa		11.77	□□□□□ -0.53
SERF2-216	ENST00000486144	GEMIN8	Q9NWZ8	242 aa	Known RBP	11.77	□□□□□ -0.53
SERF2-216	ENST00000486144	SPHK1	Q9NYA1	384 aa		11.77	□□□□□ -0.53
SERF2-216	ENST00000486144	SEMA5B	Q9P283	1151 aa		11.77	□□□□□ -0.53
SERF2-216	ENST00000486144	POMT2	Q9UKY4	750 aa		11.77	□□□□□ -0.53
SERF2-216	ENST00000486144	DHRS7	Q9Y394	339 aa		11.77	□□□□□ -0.53
SERF2-216	ENST00000486144	UBR5	O95071	2799 aa	Predicted RBP	11.77	□□□□□ -0.53
SERF2-216	ENST00000486144	TCRBV9S1A1T	A0A576	114 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	GSAP	A4D1B5	854 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	AGPS	O00116	658 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	TOX3	O15405	576 aa	Predicted RBP	11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	SYF2	O95926	243 aa	Known RBP	11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	ABHD2	P08910	425 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	ATP5D	P30049	168 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	PKLR	P30613	574 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	CBX1	P83916	185 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	SRSF6	Q13247	344 aa	Known RBP	11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	KCNAB1	Q14722	419 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	TBR1	Q16650	682 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	KYNU	Q16719	465 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	CEP85L	Q5SZL2	805 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	AGBL2	Q5U5Z8	902 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	ANKS6	Q68DC2	871 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	KLHL35	Q6PF15	583 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	C3orf62	Q6ZUJ4	267 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	PIWIL4	Q7Z3Z4	852 aa	Known RBP	11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	STRA8	Q7Z7C7	330 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	TRIM73	Q86UV7	250 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	VASH2	Q86V25	355 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	ZC3HC1	Q86WB0	502 aa	Known RBP	11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	DCUN1D3	Q8IWE4	304 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	C2orf73	Q8N5S3	287 aa	Predicted RBP	11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	ARFGAP2	Q8N6H7	521 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	DENND1A	Q8TEH3	1009 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	INPP5D	Q92835	1189 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	CTRC	Q99895	268 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	DDA1	Q9BW61	102 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	ASPSCR1	Q9BZE9	553 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	ZFAT	Q9P243	1243 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	POLG2	Q9UHN1	485 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	TUBD1	Q9UJT1	453 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	B3GALT1	Q9Y5Z6	326 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	COMMD10	Q9Y6G5	202 aa		11.76	□□□□□ -0.53
SERF2-216	ENST00000486144	TLCD2	A6NGC4	264 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	FAM159B	A6NKW6	160 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	ARHGEF33	A8MVX0	844 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144		B4E171	279 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144		H3BQF6	201 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	PYCARD-AS1	I3L0S3	204 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	RIPK2	O43353	540 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	VPS26A	O75436	327 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	PSIP1	O75475	530 aa	Known RBP	11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	CHRM5	P08912	532 aa	Predicted RBP	11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	PVR	P15151	417 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	ST6GAL1	P15907	406 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	NELFE	P18615	380 aa	Known RBP	11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	FDXR	P22570	491 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	PRDX3	P30048	256 aa	Known RBP	11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	SHMT2	P34897	504 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	TSPAN7	P41732	249 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	RAB15	P59190	212 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	MC2R	Q01718	297 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	EFTUD2	Q15029	972 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	UAP1	Q16222	522 aa	Predicted RBP	11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	HECTD2	Q5U5R9	776 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	ARMC6	Q6NXE6	501 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	BORA	Q6PGQ7	559 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	PAQR3	Q6TCH7	311 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	TAX1BP1	Q86VP1	789 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	RASGRP3	Q8IV61	690 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	FAM20C	Q8IXL6	584 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	IL22RA1	Q8N6P7	574 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	GPATCH11	Q8N954	259 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	GABPB2	Q8TAK5	448 aa	Predicted RBP	11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	FAM76A	Q8TAV0	307 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	EEF1AKMT1	Q8WVE0	214 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	SLC41A2	Q96JW4	573 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	ATP6V1G3	Q96LB4	118 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	CATSPER2	Q96P56	530 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	TEFM	Q96QE5	360 aa	Known RBP	11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	OR2A14	Q96R47	310 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	KLHL25	Q9H0H3	589 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	SLC39A1	Q9NY26	324 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	ACTR10	Q9NZ32	417 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	KLHL42	Q9P2K6	505 aa		11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	TRMT6	Q9UJA5	497 aa	Known RBP	11.75	□□□□□ -0.53
SERF2-216	ENST00000486144	PIPSL	A2A3N6	862 aa		11.74	□□□□□ -0.53
SERF2-216	ENST00000486144	SLC9B1P1	A6NJY1	282 aa		11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms