RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 FDFT1P37268 417 aa10.18□□□□□ -0.78
HMGN1-215ENST00000485550 GABRA4P48169 554 aa10.18□□□□□ -0.78
HMGN1-215ENST00000485550 SESN2P58004 480 aaPredicted RBP10.18□□□□□ -0.78
HMGN1-215ENST00000485550 PRAMEP78395 509 aa10.18□□□□□ -0.78
HMGN1-215ENST00000485550 CRADDP78560 199 aa10.18□□□□□ -0.78
HMGN1-215ENST00000485550 KYNUQ16719 465 aa10.18□□□□□ -0.78
HMGN1-215ENST00000485550 FASTKD1Q53R41 847 aaKnown RBP10.18□□□□□ -0.78
HMGN1-215ENST00000485550 LYPLAL1Q5VWZ2 237 aa10.18□□□□□ -0.78
HMGN1-215ENST00000485550 ZNF385CQ66K41 422 aaPredicted RBP10.18□□□□□ -0.78
HMGN1-215ENST00000485550 AFTPHQ6ULP2 937 aa10.18□□□□□ -0.78
HMGN1-215ENST00000485550 PACS1Q6VY07 963 aa10.18□□□□□ -0.78
HMGN1-215ENST00000485550 TAX1BP1Q86VP1 789 aa10.18□□□□□ -0.78
HMGN1-215ENST00000485550 HPS6Q86YV9 775 aa10.18□□□□□ -0.78
HMGN1-215ENST00000485550 TMEM151BQ8IW70 566 aa10.18□□□□□ -0.78
HMGN1-215ENST00000485550 ZNF655Q8N720 491 aaPredicted RBP10.18□□□□□ -0.78
HMGN1-215ENST00000485550 CCDC89Q8N998 374 aa10.18□□□□□ -0.78
HMGN1-215ENST00000485550 SMAD5Q99717 465 aaKnown RBP10.18□□□□□ -0.78
HMGN1-215ENST00000485550 AP1M1Q9BXS5 423 aa10.18□□□□□ -0.78
HMGN1-215ENST00000485550 CHRAC1Q9NRG0 131 aa10.18□□□□□ -0.78
HMGN1-215ENST00000485550 OR6C2Q9NZP2 312 aa10.18□□□□□ -0.78
HMGN1-215ENST00000485550 MARCH4Q9P2E8 410 aaPredicted RBP10.18□□□□□ -0.78
HMGN1-215ENST00000485550 GPN3Q9UHW5 284 aaPredicted RBP10.18□□□□□ -0.78
HMGN1-215ENST00000485550 ANAPC5Q9UJX4 755 aa10.18□□□□□ -0.78
HMGN1-215ENST00000485550 ITGB1BP2Q9UKP3 347 aa10.18□□□□□ -0.78
HMGN1-215ENST00000485550 CDYLQ9Y232 598 aa10.18□□□□□ -0.78
HMGN1-215ENST00000485550 NTNG1Q9Y2I2 539 aa10.18□□□□□ -0.78
HMGN1-215ENST00000485550 PTRH2Q9Y3E5 179 aaKnown RBP10.18□□□□□ -0.78
HMGN1-215ENST00000485550 TCAF1Q9Y4C2 921 aa10.18□□□□□ -0.78
HMGN1-215ENST00000485550 CACNA1CQ13936 2221 aa10.18□□□□□ -0.78
HMGN1-215ENST00000485550 ERI2A8K979 691 aaKnown RBP10.17□□□□□ -0.78
HMGN1-215ENST00000485550 H3BMH7 237 aa10.17□□□□□ -0.78
HMGN1-215ENST00000485550 LRRTM2O43300 516 aa10.17□□□□□ -0.78
HMGN1-215ENST00000485550 ZG16O60844 167 aa10.17□□□□□ -0.78
HMGN1-215ENST00000485550 KLF7O75840 302 aaPredicted RBP10.17□□□□□ -0.78
HMGN1-215ENST00000485550 HBQ1P09105 142 aa10.17□□□□□ -0.78
HMGN1-215ENST00000485550 RPL22P35268 128 aaKnown RBP10.17□□□□□ -0.78
HMGN1-215ENST00000485550 GRIA3P42263 894 aa10.17□□□□□ -0.78
HMGN1-215ENST00000485550 GLRBP48167 497 aa10.17□□□□□ -0.78
HMGN1-215ENST00000485550 TERF1P54274 439 aa10.17□□□□□ -0.78
HMGN1-215ENST00000485550 DCDP81605 110 aaKnown RBP10.17□□□□□ -0.78
HMGN1-215ENST00000485550 PLOD1Q02809 727 aaPredicted RBP10.17□□□□□ -0.78
HMGN1-215ENST00000485550 MED25Q71SY5 747 aa10.17□□□□□ -0.78
HMGN1-215ENST00000485550 RAB43Q86YS6 212 aa10.17□□□□□ -0.78
HMGN1-215ENST00000485550 DNAJC22Q8N4W6 341 aa10.17□□□□□ -0.78
HMGN1-215ENST00000485550 RNF10Q8N5U6 811 aaKnown RBP10.17□□□□□ -0.78
HMGN1-215ENST00000485550 TMEM102Q8N9M5 508 aaPredicted RBP10.17□□□□□ -0.78
HMGN1-215ENST00000485550 LINC01555Q8NAE3 123 aa10.17□□□□□ -0.78
HMGN1-215ENST00000485550 PPHLN1Q8NEY8 458 aaKnown RBP10.17□□□□□ -0.78
HMGN1-215ENST00000485550 INPP5DQ92835 1189 aa10.17□□□□□ -0.78
HMGN1-215ENST00000485550 SGSM3Q96HU1 749 aa10.17□□□□□ -0.78
HMGN1-215ENST00000485550 TXLNGQ9NUQ3 528 aa10.17□□□□□ -0.78
HMGN1-215ENST00000485550 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.17□□□□□ -0.78
HMGN1-215ENST00000485550 IFT80Q9P2H3 777 aaPredicted RBP10.17□□□□□ -0.78
HMGN1-215ENST00000485550 B3GNT3Q9Y2A9 372 aa10.17□□□□□ -0.78
HMGN1-215ENST00000485550 PADI2Q9Y2J8 665 aa10.17□□□□□ -0.78
HMGN1-215ENST00000485550 COPG1Q9Y678 874 aaKnown RBP10.17□□□□□ -0.78
HMGN1-215ENST00000485550 AP1M2Q9Y6Q5 423 aa10.17□□□□□ -0.78
HMGN1-215ENST00000485550 SNRNP200O75643 2136 aaKnown RBP10.16□□□□□ -0.78
HMGN1-215ENST00000485550 AKAP9Q99996 3911 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 KRT87PA6NCN2 255 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 GPR37O15354 613 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 ZSCAN9O15535 394 aaPredicted RBP10.16□□□□□ -0.78
HMGN1-215ENST00000485550 KDM1AO60341 852 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 CNOT3O75175 753 aaKnown RBP10.16□□□□□ -0.78
HMGN1-215ENST00000485550 GPC4O75487 556 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 MAGP20916 626 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 CD9P21926 228 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 CDC25BP30305 580 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 PKLRP30613 574 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 FOLR3P41439 243 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 ACVR1Q04771 509 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 SSPNQ14714 243 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 KIR2DS3Q14952 304 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 RPS6KA1Q15418 735 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 ZRSR2Q15696 482 aaKnown RBP10.16□□□□□ -0.78
HMGN1-215ENST00000485550 SLC5A12Q1EHB4 618 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 ZXDCQ2QGD7 858 aaPredicted RBP10.16□□□□□ -0.78
HMGN1-215ENST00000485550 PCID2Q5JVF3 399 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 PTRHD1Q6GMV3 140 aaKnown RBP10.16□□□□□ -0.78
HMGN1-215ENST00000485550 RHBDD2Q6NTF9 364 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 CES3Q6UWW8 571 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 MCATQ8IVS2 390 aaKnown RBP10.16□□□□□ -0.78
HMGN1-215ENST00000485550 SLC22A15Q8IZD6 547 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 ASZ1Q8WWH4 475 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 GBP5Q96PP8 586 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 DPH2Q9BQC3 489 aaPredicted RBP10.16□□□□□ -0.78
HMGN1-215ENST00000485550 NDC1Q9BTX1 674 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 DHRS4Q9BTZ2 278 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 CARD6Q9BX69 1037 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 FRMD8P1Q9BZ68 369 aaPredicted RBP10.16□□□□□ -0.78
HMGN1-215ENST00000485550 ILKAPQ9H0C8 392 aaPredicted RBP10.16□□□□□ -0.78
HMGN1-215ENST00000485550 CATSPERZQ9NTU4 200 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 EURLQ9NYK6 297 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 PAK5Q9P286 719 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 NDOR1Q9UHB4 597 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 RIMKLBQ9ULI2 386 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 PLCL2Q9UPR0 1127 aa10.16□□□□□ -0.78
HMGN1-215ENST00000485550 RUVBL2Q9Y230 463 aaKnown RBP10.16□□□□□ -0.78
HMGN1-215ENST00000485550 DCHS2Q6V1P9 2916 aa10.15□□□□□ -0.78
HMGN1-215ENST00000485550 GOLGA8KD6RF30 607 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms