RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 GRIP2Q9C0E4 1043 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 STRADBQ9C0K7 418 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 CDH19Q9H159 772 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 ZFYVE1Q9HBF4 777 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 ASCL3Q9NQ33 180 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 RAB6BQ9NRW1 208 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 THSD1Q9NS62 852 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 FAIMQ9NVQ4 179 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 RHBDL2Q9NX52 303 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 UBP1Q9NZI7 540 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 RSL24D1Q9UHA3 163 aaKnown RBP10.49□□□□□ -0.73
DDX56-212ENST00000485367 RIMS3Q9UJD0 308 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 ATXN7L1Q9ULK2 861 aaPredicted RBP10.49□□□□□ -0.73
DDX56-212ENST00000485367 ST14Q9Y5Y6 855 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 ZFC3H1O60293 1989 aaKnown RBP10.49□□□□□ -0.73
DDX56-212ENST00000485367 PTPRQQ9UMZ3 2332 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 RGSL1A5PLK6 1076 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 ZNF701M0R085 212 aaPredicted RBP10.49□□□□□ -0.73
DDX56-212ENST00000485367 AGRPO00253 132 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 NUDT21O43809 227 aaKnown RBP10.49□□□□□ -0.73
DDX56-212ENST00000485367 PLIN3O60664 434 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 H2AFYO75367 372 aaKnown RBP10.49□□□□□ -0.73
DDX56-212ENST00000485367 STK10O94804 968 aaKnown RBP10.49□□□□□ -0.73
DDX56-212ENST00000485367 TNFSF15O95150 251 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 HNRNPCP07910 306 aaKnown RBP eCLIP10.49□□□□□ -0.73
DDX56-212ENST00000485367 PNLIPP16233 465 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 ACTR1BP42025 376 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 NUP107P57740 925 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 OR1D5P58170 312 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 ACTR1AP61163 376 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 ABCE1P61221 599 aaKnown RBP10.49□□□□□ -0.73
DDX56-212ENST00000485367 MYBPC1Q00872 1141 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 GSTM4Q03013 218 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 PEX6Q13608 980 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 HENMT1Q5T8I9 393 aaKnown RBP10.49□□□□□ -0.73
DDX56-212ENST00000485367 MFSD4BQ5TF39 518 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 STEAP4Q687X5 459 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 UNC5AQ6ZN44 842 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 FRMD7Q6ZUT3 714 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 CAND1Q86VP6 1230 aaKnown RBP10.49□□□□□ -0.73
DDX56-212ENST00000485367 SLC15A3Q8IY34 581 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 ARL14Q8N4G2 192 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 POU5F2Q8N7G0 328 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 ZNF248Q8NDW4 579 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 PATE1Q8WXA2 126 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 TADA1Q96BN2 335 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 SLC46A1Q96NT5 459 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 GPR63Q9BZJ6 419 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 ZNF395Q9H8N7 513 aaPredicted RBP10.49□□□□□ -0.73
DDX56-212ENST00000485367 PLGRKTQ9HBL7 147 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 HACD3Q9P035 362 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 KLHL8Q9P2G9 620 aaPredicted RBP10.49□□□□□ -0.73
DDX56-212ENST00000485367 CNOT6Q9ULM6 557 aaKnown RBP10.49□□□□□ -0.73
DDX56-212ENST00000485367 ZNF711Q9Y462 761 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 PRKAB1Q9Y478 270 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 PCDHGA8Q9Y5G5 932 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 CEPT1Q9Y6K0 416 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 OAS3Q9Y6K5 1087 aaKnown RBP10.49□□□□□ -0.73
DDX56-212ENST00000485367 SH3PXD2BA1X283 911 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 HMX2A2RU54 273 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 FADS2P1A8MWK0 482 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 TMEM114B3SHH9 223 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 F5H423 210 aaPredicted RBP10.48□□□□□ -0.73
DDX56-212ENST00000485367 ZNF195O14628 629 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 MTSS1O43312 755 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 NDST3O95803 873 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 NFKB1P19838 968 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 ALDH4A1P30038 563 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 SLC5A2P31639 672 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 CD68P34810 354 aaPredicted RBP10.48□□□□□ -0.73
DDX56-212ENST00000485367 ALDH3B2P48448 385 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 ERFP50548 548 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 SLC14A2Q15849 920 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 BCL2A1Q16548 175 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 AMZ1Q400G9 498 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 CCDC153Q494R4 210 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 TCHHL1Q5QJ38 904 aaPredicted RBP10.48□□□□□ -0.73
DDX56-212ENST00000485367 C17orf82Q86X59 251 aaPredicted RBP10.48□□□□□ -0.73
DDX56-212ENST00000485367 SPACA3Q8IXA5 215 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 FBXO39Q8N4B4 442 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 SREK1Q8WXA9 508 aaKnown RBP10.48□□□□□ -0.73
DDX56-212ENST00000485367 CDKL2Q92772 493 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 EID2BQ96D98 161 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 LIN37Q96GY3 246 aaPredicted RBP10.48□□□□□ -0.73
DDX56-212ENST00000485367 VPS50Q96JG6 964 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 DNAJC1Q96KC8 554 aaKnown RBP10.48□□□□□ -0.73
DDX56-212ENST00000485367 DHRS1Q96LJ7 313 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 TMEM74Q96NL1 305 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 SORT1Q99523 831 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 PRPF18Q99633 342 aaKnown RBP10.48□□□□□ -0.73
DDX56-212ENST00000485367 C10orf88Q9H8K7 445 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 PLAC1Q9HBJ0 212 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 MAGEE1Q9HCI5 957 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 SMYD2Q9NRG4 433 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 DDX18Q9NVP1 670 aaKnown RBP10.48□□□□□ -0.73
DDX56-212ENST00000485367 MOCS1Q9NZB8 636 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 SPO11Q9Y5K1 396 aa10.48□□□□□ -0.73
DDX56-212ENST00000485367 TRBV23OR9-2A0A075B6M9 112 aa10.47□□□□□ -0.73
DDX56-212ENST00000485367 TMEM247A6NEH6 219 aa10.47□□□□□ -0.73
DDX56-212ENST00000485367 H7C0C1 242 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms