RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.16□□□□□ -1.42
CAPN13-206ENST00000485248 MEMO1Q9Y316 297 aa6.16□□□□□ -1.42
CAPN13-206ENST00000485248 PIKFYVEQ9Y2I7 2098 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 TRAV17A0A0B4J275 112 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 CFAP69A5D8W1 941 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 DPPA5A6NC42 116 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 FAM90A27PA6NNH2 459 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 NDC80O14777 642 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 TGFB1I1O43294 461 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 PRAMEF2O60811 474 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 ATE1O95260 518 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 NR3C1P04150 777 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 CYP1A2P05177 515 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 CEACAM5P06731 702 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 T-ENOLP0DO92 83 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 BMP7P18075 431 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 TNFAIP3P21580 790 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 UGT1A4P22310 534 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 ALDH3A1P30838 453 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 TRIM23P36406 574 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 SSR1P43307 286 aaKnown RBP6.15□□□□□ -1.42
CAPN13-206ENST00000485248 ACADSBP45954 432 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 NKX6-1P78426 367 aaPredicted RBP6.15□□□□□ -1.42
CAPN13-206ENST00000485248 ARF5P84085 180 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 GNA12Q03113 381 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 KLC1Q07866 573 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 MGAT5Q09328 741 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 CALCOCO2Q13137 446 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 DYNC1I2Q13409 638 aaKnown RBP6.15□□□□□ -1.42
CAPN13-206ENST00000485248 LAMB3Q13751 1172 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 PTK6Q13882 451 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 SETDB1Q15047 1291 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 STILQ15468 1287 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 ATXN7L2Q5T6C5 722 aaPredicted RBP6.15□□□□□ -1.42
CAPN13-206ENST00000485248 ACBD5Q5T8D3 534 aaPredicted RBP6.15□□□□□ -1.42
CAPN13-206ENST00000485248 SYPL2Q5VXT5 272 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 OR52E8Q6IFG1 317 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 BRAT1Q6PJG6 821 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 CCDC137Q6PK04 289 aaKnown RBP6.15□□□□□ -1.42
CAPN13-206ENST00000485248 CHSY3Q70JA7 882 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 MARK2Q7KZI7 788 aaKnown RBP6.15□□□□□ -1.42
CAPN13-206ENST00000485248 BEND5Q7L4P6 421 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 PAQR7Q86WK9 346 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 PHYKPLQ8IUZ5 450 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 SULF2Q8IWU5 870 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 C12orf56Q8IXR9 622 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 CYP4X1Q8N118 509 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 FAM13CQ8NE31 585 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 LMO3Q8TAP4 145 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 GRK7Q8WTQ7 553 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 ASB5Q8WWX0 329 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 HPS1Q92902 700 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 ITFG2Q969R8 447 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 LRFN5Q96NI6 719 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 NR1H4Q96RI1 486 aaPredicted RBP6.15□□□□□ -1.42
CAPN13-206ENST00000485248 TSC22D3Q99576 134 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 TREX2Q9BQ50 279 aaPredicted RBP6.15□□□□□ -1.42
CAPN13-206ENST00000485248 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.15□□□□□ -1.42
CAPN13-206ENST00000485248 CDC42EP4Q9H3Q1 356 aaKnown RBP6.15□□□□□ -1.42
CAPN13-206ENST00000485248 AKIRIN1Q9H9L7 192 aaPredicted RBP6.15□□□□□ -1.42
CAPN13-206ENST00000485248 APOBEC3GQ9HC16 384 aaKnown RBP6.15□□□□□ -1.42
CAPN13-206ENST00000485248 KCNJ16Q9NPI9 418 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 P4HTMQ9NXG6 502 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 LRFN1Q9P244 771 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 CPSF2Q9P2I0 782 aaKnown RBP6.15□□□□□ -1.42
CAPN13-206ENST00000485248 UVRAGQ9P2Y5 699 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 STOML1Q9UBI4 398 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 APEX2Q9UBZ4 518 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 NDOR1Q9UHB4 597 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 KIAA1257Q9ULG3 409 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 LRCH1Q9Y2L9 728 aa6.15□□□□□ -1.42
CAPN13-206ENST00000485248 FLNAP21333 2647 aaKnown RBP6.15□□□□□ -1.43
CAPN13-206ENST00000485248 NSD1Q96L73 2696 aaPredicted RBP6.15□□□□□ -1.43
CAPN13-206ENST00000485248 CXorf51AA0A1B0GTR3 108 aa6.14□□□□□ -1.43
CAPN13-206ENST00000485248 UBA6A0AVT1 1052 aaPredicted RBP6.14□□□□□ -1.43
CAPN13-206ENST00000485248 ALG1L2C9J202 215 aa6.14□□□□□ -1.43
CAPN13-206ENST00000485248 H7C1Q1 480 aa6.14□□□□□ -1.43
CAPN13-206ENST00000485248 EDF1O60869 148 aaKnown RBP6.14□□□□□ -1.43
CAPN13-206ENST00000485248 TSPAN12O95859 305 aa6.14□□□□□ -1.43
CAPN13-206ENST00000485248 EBLN1P0CF75 366 aa6.14□□□□□ -1.43
CAPN13-206ENST00000485248 F3P13726 295 aa6.14□□□□□ -1.43
CAPN13-206ENST00000485248 CYP2A7P20853 494 aa6.14□□□□□ -1.43
CAPN13-206ENST00000485248 MMP12P39900 470 aa6.14□□□□□ -1.43
CAPN13-206ENST00000485248 CAPZBP47756 277 aa6.14□□□□□ -1.43
CAPN13-206ENST00000485248 GCLMP48507 274 aa6.14□□□□□ -1.43
CAPN13-206ENST00000485248 FMO5P49326 533 aa6.14□□□□□ -1.43
CAPN13-206ENST00000485248 RPL26P61254 145 aaKnown RBP6.14□□□□□ -1.43
CAPN13-206ENST00000485248 POLR2LP62875 67 aaKnown RBP6.14□□□□□ -1.43
CAPN13-206ENST00000485248 YWHAZP63104 245 aaKnown RBP6.14□□□□□ -1.43
CAPN13-206ENST00000485248 CDK3Q00526 305 aa6.14□□□□□ -1.43
CAPN13-206ENST00000485248 PCBP2Q15366 365 aaKnown RBP eCLIP6.14□□□□□ -1.43
CAPN13-206ENST00000485248 CDSNQ15517 529 aa6.14□□□□□ -1.43
CAPN13-206ENST00000485248 PDK4Q16654 411 aa6.14□□□□□ -1.43
CAPN13-206ENST00000485248 ALFQ53S48 1182 aa6.14□□□□□ -1.43
CAPN13-206ENST00000485248 SEL1L2Q5TEA6 688 aa6.14□□□□□ -1.43
CAPN13-206ENST00000485248 FAM69BQ5VUD6 431 aa6.14□□□□□ -1.43
CAPN13-206ENST00000485248 PMF1Q6P1K2 205 aa6.14□□□□□ -1.43
CAPN13-206ENST00000485248 KLHL35Q6PF15 583 aa6.14□□□□□ -1.43
CAPN13-206ENST00000485248 PAMR1Q6UXH9 720 aa6.14□□□□□ -1.43
CAPN13-206ENST00000485248 ISLR2Q6UXK2 745 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms