RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 DTD2Q96FN9 168 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 CLK4Q9HAZ1 481 aaKnown RBP14.07□□□□□ -0.16
CHD3-211ENST00000481999 PARVBQ9HBI1 364 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 PRSS16Q9NQE7 514 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 TMEM45AQ9NWC5 275 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 ETAA1Q9NY74 926 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 GDE1Q9NZC3 331 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 CDH7Q9ULB5 785 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 CCL27Q9Y4X3 112 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 A0A0C4DFX4 3053 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.06□□□□□ -0.16
CHD3-211ENST00000481999 A0A1B0GTW7 788 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.06□□□□□ -0.16
CHD3-211ENST00000481999 PRR23AA6NEV1 266 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 ARHGEF33A8MVX0 844 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 AREL1O15033 823 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 NUAK1O60285 661 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 POU2F2P09086 479 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 FCGR1AP12314 374 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 CDH2P19022 906 aaPredicted RBP14.06□□□□□ -0.16
CHD3-211ENST00000481999 P2RY2P41231 377 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 FCHO2Q0JRZ9 810 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 CNTN1Q12860 1018 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 ADGRG5Q8IZF4 528 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 TMEM125Q96AQ2 219 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 CENPNQ96H22 339 aaPredicted RBP14.06□□□□□ -0.16
CHD3-211ENST00000481999 COQ10AQ96MF6 247 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 TMEM74Q96NL1 305 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 C9orf16Q9BUW7 83 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 SLC12A9Q9BXP2 914 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 BRINP2Q9C0B6 783 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 INTS7Q9NVH2 962 aaKnown RBP14.06□□□□□ -0.16
CHD3-211ENST00000481999 RIC8BQ9NVN3 520 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 ZNF490Q9ULM2 529 aaPredicted RBP14.06□□□□□ -0.16
CHD3-211ENST00000481999 TMEM98Q9Y2Y6 226 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 CEPT1Q9Y6K0 416 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 EDDM13A0A1B0GTR0 161 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 ANKRD33BA6NCL7 494 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 EEDO75530 441 aaKnown RBP14.06□□□□□ -0.16
CHD3-211ENST00000481999 SLC22A3O75751 556 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 B3GALT4O96024 378 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 ITGB7P26010 798 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 ALDH3B2P48448 385 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 ERVK-8P63133 956 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 PLOD1Q02809 727 aaPredicted RBP14.06□□□□□ -0.16
CHD3-211ENST00000481999 SF1Q15637 639 aaKnown RBP14.06□□□□□ -0.16
CHD3-211ENST00000481999 PDCD4Q53EL6 469 aaKnown RBP14.06□□□□□ -0.16
CHD3-211ENST00000481999 ZDHHC20Q5W0Z9 365 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 DOK6Q6PKX4 331 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 TRAPPC5Q8IUR0 188 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 CHPFQ8IZ52 775 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 FAM47BQ8NA70 645 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 TRPV3Q8NET8 790 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 SUSD6Q92537 303 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 EZH1Q92800 747 aaPredicted RBP14.06□□□□□ -0.16
CHD3-211ENST00000481999 KLK6Q92876 244 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 ALG2Q9H553 416 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 ACTR8Q9H981 624 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 CLEC1BQ9P126 229 aa14.06□□□□□ -0.16
CHD3-211ENST00000481999 LEF1Q9UJU2 399 aaPredicted RBP14.06□□□□□ -0.16
CHD3-211ENST00000481999 GON4LQ3T8J9 2241 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 A0A1B0GVG6 124 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 KANSL1LA0AUZ9 987 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 CFAP99D6REC4 459 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 H3BSA7 217 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 LZTS3O60299 673 aaPredicted RBP14.05□□□□□ -0.16
CHD3-211ENST00000481999 C7P10643 843 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 SLC2A4P14672 509 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 GSK3BP49841 420 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 AASDHQ4L235 1098 aaPredicted RBP14.05□□□□□ -0.16
CHD3-211ENST00000481999 SLC2A7Q6PXP3 512 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 IFNEQ86WN2 208 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 PTRH1Q86Y79 214 aaKnown RBP14.05□□□□□ -0.16
CHD3-211ENST00000481999 ZNF547Q8IVP9 402 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 RGL4Q8IZJ4 473 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 LRIG1Q96JA1 1093 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 KCTD14Q9BQ13 255 aaPredicted RBP14.05□□□□□ -0.16
CHD3-211ENST00000481999 KIAA1549LQ6ZVL6 1849 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 CCDC154A6NI56 674 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 GFYI3L273 518 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 MID1O15344 667 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 NELFEP18615 380 aaKnown RBP14.05□□□□□ -0.16
CHD3-211ENST00000481999 CCT8P50990 548 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 EEFSECP57772 596 aaKnown RBP14.05□□□□□ -0.16
CHD3-211ENST00000481999 LIPEQ05469 1076 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 PDGFRLQ15198 375 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 KCTD21Q4G0X4 260 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 SYTL3Q4VX76 610 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 ANKRD54Q6NXT1 300 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 AADATQ8N5Z0 425 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 KRTCAP2Q8N6L1 136 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 TNIP2Q8NFZ5 429 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 ASZ1Q8WWH4 475 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 NUS1Q96E22 293 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 MED8Q96G25 268 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 LGR4Q9BXB1 951 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 RDH14Q9HBH5 336 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 TM7SF3Q9NS93 570 aa14.05□□□□□ -0.16
CHD3-211ENST00000481999 THG1LQ9NWX6 298 aaKnown RBP14.05□□□□□ -0.16
CHD3-211ENST00000481999 ZIM2Q9NZV7 527 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms