RNA–Protein interactions for RNA: ENST00000481807.3

MECP2-208, Transcript of methyl-CpG binding protein 2, human

TSL 3

Gene MECP2, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECP2-208	ENST00000481807	SCARF2	Q96GP6	870 aa	Predicted RBP	7.75	□□□□□ -1.17
MECP2-208	ENST00000481807	LOXL4	Q96JB6	756 aa		7.75	□□□□□ -1.17
MECP2-208	ENST00000481807	PPP1R36	Q96LQ0	422 aa		7.75	□□□□□ -1.17
MECP2-208	ENST00000481807	C3orf30	Q96M34	536 aa		7.75	□□□□□ -1.17
MECP2-208	ENST00000481807	CATSPER2	Q96P56	530 aa		7.75	□□□□□ -1.17
MECP2-208	ENST00000481807	KCNA7	Q96RP8	456 aa		7.75	□□□□□ -1.17
MECP2-208	ENST00000481807	CADM1	Q9BY67	442 aa	Known RBP	7.75	□□□□□ -1.17
MECP2-208	ENST00000481807	SLC17A9	Q9BYT1	436 aa		7.75	□□□□□ -1.17
MECP2-208	ENST00000481807	OR52A5	Q9H2C5	316 aa		7.75	□□□□□ -1.17
MECP2-208	ENST00000481807	AKTIP	Q9H8T0	292 aa		7.75	□□□□□ -1.17
MECP2-208	ENST00000481807	ITM2C	Q9NQX7	267 aa		7.75	□□□□□ -1.17
MECP2-208	ENST00000481807	SDR39U1	Q9NRG7	319 aa	Predicted RBP	7.75	□□□□□ -1.17
MECP2-208	ENST00000481807	RIC8B	Q9NVN3	520 aa		7.75	□□□□□ -1.17
MECP2-208	ENST00000481807	POLG2	Q9UHN1	485 aa		7.75	□□□□□ -1.17
MECP2-208	ENST00000481807	TSR3	Q9UJK0	312 aa	Known RBP	7.75	□□□□□ -1.17
MECP2-208	ENST00000481807	MRPS17	Q9Y2R5	130 aa	Known RBP	7.75	□□□□□ -1.17
MECP2-208	ENST00000481807	FIS1	Q9Y3D6	152 aa		7.75	□□□□□ -1.17
MECP2-208	ENST00000481807	ANKRD12	Q6UB98	2062 aa		7.75	□□□□□ -1.17
MECP2-208	ENST00000481807	SERTM1	A2A2V5	107 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	PRR19	A6NJB7	356 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	CHURC1-FNTB	B4DL54	471 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	NPIPB8	E9PQR5	432 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	PSMD12	O00232	456 aa	Predicted RBP	7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	KMO	O15229	486 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	RNGTT	O60942	597 aa	Known RBP	7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	WFS1	O76024	890 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	CLDN9	O95484	217 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	C1orf105	O95561	183 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	CAPN1	P07384	714 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	ALDOC	P09972	364 aa	Known RBP	7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	ACADM	P11310	421 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	IDO1	P14902	403 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	EPOR	P19235	508 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	NDUFV2	P19404	249 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	HMOX2	P30519	316 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	HOXA6	P31267	233 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	PREP	P48147	710 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	RAP1GDS1	P52306	607 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	DGKE	P52429	567 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	STX1B	P61266	288 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	CYLC2	Q14093	348 aa	Predicted RBP	7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	SIM2	Q14190	667 aa	Predicted RBP	7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	E2F2	Q14209	437 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	INPP5A	Q14642	412 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	ZRSR2	Q15696	482 aa	Known RBP	7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	PTCHD3	Q3KNS1	767 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	C10orf62	Q5T681	223 aa	Predicted RBP	7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	STPG1	Q5TH74	334 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	METRNL	Q641Q3	311 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	CYB5D1	Q6P9G0	228 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	ZNF852	Q6ZMS4	543 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	MBOAT1	Q6ZNC8	495 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	RINL	Q6ZS11	566 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	TRIM46	Q7Z4K8	759 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	MILR1	Q7Z6M3	343 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	PDZD3	Q86UT5	571 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	CFAP206	Q8IYR0	622 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	LILRA3	Q8N6C8	439 aa	Predicted RBP	7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	CDYL2	Q8N8U2	506 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	OR2T34	Q8NGX1	318 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	OR56A3	Q8NH54	315 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	RPLP0P6	Q8NHW5	317 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	METTL6	Q8TCB7	284 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	MAGEC3	Q8TD91	643 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	GANC	Q8TET4	914 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	TSPEAR	Q8WU66	669 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	FOXJ1	Q92949	421 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	USP7	Q93009	1102 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	ATP6V1E2	Q96A05	226 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	TIMM29	Q9BSF4	260 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	BRINP2	Q9C0B6	783 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	SGK2	Q9HBY8	427 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	MBNL1	Q9NR56	388 aa	Known RBP	7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	DNAJC11	Q9NVH1	559 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	NDE1	Q9NXR1	346 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	GPRC5B	Q9NZH0	403 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	USP36	Q9P275	1121 aa	Known RBP	7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	STOX2	Q9P2F5	926 aa	Predicted RBP	7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	ACSL5	Q9ULC5	683 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	SLC17A4	Q9Y2C5	497 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	TIMM22	Q9Y584	194 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	ADAMTS20	P59510	1910 aa		7.74	□□□□□ -1.17
MECP2-208	ENST00000481807	CFAP46	Q8IYW2	2715 aa		7.73	□□□□□ -1.17
MECP2-208	ENST00000481807	PCNX2	A6NKB5	2137 aa		7.73	□□□□□ -1.17
MECP2-208	ENST00000481807	APC2	O95996	2303 aa		7.73	□□□□□ -1.17
MECP2-208	ENST00000481807	TBC1D3D	A0A087WVF3	549 aa		7.73	□□□□□ -1.17
MECP2-208	ENST00000481807	TBC1D3I	A0A087WXS9	549 aa		7.73	□□□□□ -1.17
MECP2-208	ENST00000481807	TBC1D3E	A0A087X179	549 aa		7.73	□□□□□ -1.17
MECP2-208	ENST00000481807	TBC1D3K	A0A087X1G2	549 aa		7.73	□□□□□ -1.17
MECP2-208	ENST00000481807	ATP6AP2	A0A1C7CYW4	349 aa		7.73	□□□□□ -1.17
MECP2-208	ENST00000481807	TBC1D3F	A6NER0	549 aa	Predicted RBP	7.73	□□□□□ -1.17
MECP2-208	ENST00000481807	LRRC72	A6NJI9	287 aa		7.73	□□□□□ -1.17
MECP2-208	ENST00000481807	BBIP1	A8MTZ0	92 aa		7.73	□□□□□ -1.17
MECP2-208	ENST00000481807	TBC1D3L	B9A6J9	549 aa		7.73	□□□□□ -1.17
MECP2-208	ENST00000481807	SLC28A1	O00337	649 aa		7.73	□□□□□ -1.17
MECP2-208	ENST00000481807	MANBA	O00462	879 aa		7.73	□□□□□ -1.17
MECP2-208	ENST00000481807	TOR1B	O14657	336 aa		7.73	□□□□□ -1.17
MECP2-208	ENST00000481807	LAT	O43561	262 aa		7.73	□□□□□ -1.17
MECP2-208	ENST00000481807	ATP6AP2	O75787	350 aa		7.73	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms