RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 ARHGAP12Q8IWW6 846 aa10.4□□□□□ -0.74
SIK3-210ENST00000480468 NIM1KQ8IY84 436 aa10.4□□□□□ -0.74
SIK3-210ENST00000480468 YIPF7Q8N8F6 280 aa10.4□□□□□ -0.74
SIK3-210ENST00000480468 NETO1Q8TDF5 533 aa10.4□□□□□ -0.74
SIK3-210ENST00000480468 GGHQ92820 318 aa10.4□□□□□ -0.74
SIK3-210ENST00000480468 TNIP3Q96KP6 325 aa10.4□□□□□ -0.74
SIK3-210ENST00000480468 COLEC11Q9BWP8 271 aa10.4□□□□□ -0.74
SIK3-210ENST00000480468 MMP28Q9H239 520 aa10.4□□□□□ -0.74
SIK3-210ENST00000480468 SLC25A37Q9NYZ2 338 aa10.4□□□□□ -0.74
SIK3-210ENST00000480468 MARCH4Q9P2E8 410 aaPredicted RBP10.4□□□□□ -0.74
SIK3-210ENST00000480468 SCAF8Q9UPN6 1271 aaKnown RBP10.4□□□□□ -0.74
SIK3-210ENST00000480468 RALGAPA2Q2PPJ7 1873 aa10.4□□□□□ -0.74
SIK3-210ENST00000480468 A0A0B4J293 547 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 LCHNA4D1U4 455 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 ASB14A6NK59 587 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 MEN1O00255 615 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 MAFKO60675 156 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 ECI2O75521 394 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 SLC2A3P11169 496 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 CBLP22681 906 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 LMO2P25791 158 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 EPHA2P29317 976 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 SLC19A1P41440 591 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 MAPK12P53778 367 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 PCDH1Q08174 1060 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 EIF2B5Q13144 721 aaKnown RBP10.39□□□□□ -0.75
SIK3-210ENST00000480468 SEMA3AQ14563 771 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 ZBTB6Q15916 424 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 BAK1Q16611 211 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 MAPKAPK3Q16644 382 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 BTBD16Q32M84 506 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 RAP1GAP2Q684P5 730 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 SCIMPQ6UWF3 145 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 ZNF782Q6ZMW2 699 aaPredicted RBP10.39□□□□□ -0.75
SIK3-210ENST00000480468 LIMS2Q7Z4I7 341 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 AMIGO1Q86WK6 493 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 ZSWIM9Q86XI8 627 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 MTMR14Q8NCE2 650 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 OR6P1Q8NGX9 317 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 DNAJA4Q8WW22 397 aaPredicted RBP10.39□□□□□ -0.75
SIK3-210ENST00000480468 RNF31Q96EP0 1072 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 GMLQ99445 158 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 TBCDQ9BTW9 1192 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 SLC25A51Q9H1U9 297 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 TIGARQ9NQ88 270 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 PDP1Q9P0J1 537 aaPredicted RBP10.39□□□□□ -0.75
SIK3-210ENST00000480468 KIF17Q9P2E2 1029 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 TNFRSF10DQ9UBN6 386 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 PCDHGA6Q9Y5G7 932 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 DFFAO00273 331 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 ERN1O75460 977 aaKnown RBP10.39□□□□□ -0.75
SIK3-210ENST00000480468 PDE9AO76083 593 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 IL6P05231 212 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 EDNRBP24530 442 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 NDUFV1P49821 464 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 ACVR1Q04771 509 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 RIPPLY1Q0D2K3 151 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 CAMK2GQ13555 558 aaPredicted RBP10.39□□□□□ -0.75
SIK3-210ENST00000480468 GTF2H3Q13889 308 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 RBBP7Q16576 425 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 GNASQ5JWF2 1037 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 C10orf62Q5T681 223 aaPredicted RBP10.39□□□□□ -0.75
SIK3-210ENST00000480468 SDE2Q6IQ49 451 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 CCDC149Q6ZUS6 474 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 PGBD3Q8N328 593 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 GALNT11Q8NCW6 608 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 CHTF18Q8WVB6 975 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 UBE2FQ969M7 185 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 GPR20Q99678 358 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 KCNS3Q9BQ31 491 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 AARSD1Q9BTE6 412 aaKnown RBP10.39□□□□□ -0.75
SIK3-210ENST00000480468 ATXN3LQ9H3M9 355 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 QTRT2Q9H974 415 aaKnown RBP10.39□□□□□ -0.75
SIK3-210ENST00000480468 RBM22Q9NW64 420 aaKnown RBP eCLIP10.39□□□□□ -0.75
SIK3-210ENST00000480468 DDIT4Q9NX09 232 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 OSER1Q9NX31 292 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 CRYL1Q9Y2S2 319 aa10.39□□□□□ -0.75
SIK3-210ENST00000480468 EFCAB10A6NFE3 127 aa10.38□□□□□ -0.75
SIK3-210ENST00000480468 HBP1O60381 514 aa10.38□□□□□ -0.75
SIK3-210ENST00000480468 CCNDBP1O95273 360 aa10.38□□□□□ -0.75
SIK3-210ENST00000480468 SEMG1P04279 462 aa10.38□□□□□ -0.75
SIK3-210ENST00000480468 CCNYL3P0C7X3 344 aa10.38□□□□□ -0.75
SIK3-210ENST00000480468 ALAS2P22557 587 aa10.38□□□□□ -0.75
SIK3-210ENST00000480468 HTR7P34969 479 aa10.38□□□□□ -0.75
SIK3-210ENST00000480468 ARSDP51689 593 aa10.38□□□□□ -0.75
SIK3-210ENST00000480468 DAOAP59103 153 aa10.38□□□□□ -0.75
SIK3-210ENST00000480468 POU6F2P78424 691 aaPredicted RBP10.38□□□□□ -0.75
SIK3-210ENST00000480468 QPRTQ15274 297 aa10.38□□□□□ -0.75
SIK3-210ENST00000480468 INO80DQ53TQ3 878 aaPredicted RBP10.38□□□□□ -0.75
SIK3-210ENST00000480468 HABP4Q5JVS0 413 aaKnown RBP10.38□□□□□ -0.75
SIK3-210ENST00000480468 PXDC1Q5TGL8 231 aa10.38□□□□□ -0.75
SIK3-210ENST00000480468 LRRC66Q68CR7 880 aa10.38□□□□□ -0.75
SIK3-210ENST00000480468 LAMTOR1Q6IAA8 161 aa10.38□□□□□ -0.75
SIK3-210ENST00000480468 MRNIPQ6NTE8 343 aa10.38□□□□□ -0.75
SIK3-210ENST00000480468 GDPGP1Q6ZNW5 385 aa10.38□□□□□ -0.75
SIK3-210ENST00000480468 ARMCX2Q7L311 632 aa10.38□□□□□ -0.75
SIK3-210ENST00000480468 LDB1Q86U70 411 aaPredicted RBP10.38□□□□□ -0.75
SIK3-210ENST00000480468 ATCAYQ86WG3 371 aa10.38□□□□□ -0.75
SIK3-210ENST00000480468 GDPD1Q8N9F7 314 aa10.38□□□□□ -0.75
SIK3-210ENST00000480468 TRAPPC12Q8WVT3 735 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms