RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 KLHL10Q6JEL2 608 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 ARHGAP11AQ6P4F7 1023 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 SARM1Q6SZW1 724 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 DET1Q7L5Y6 550 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 TMC3Q7Z5M5 1100 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 DAAM2Q86T65 1068 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 CRLF3Q8IUI8 442 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 FLVCR1-AS1Q8TAF5 88 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 ARRDC2Q8TBH0 407 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 IMMP1LQ96LU5 166 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 ZNF354BQ96LW1 612 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 MCEEQ96PE7 176 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 PEBP4Q96S96 227 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 NPAS2Q99743 824 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 IL1RAPL1Q9NZN1 696 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 CWC15Q9P013 229 aaKnown RBP11.25□□□□□ -0.61
USP11-208ENST00000480104 ICKQ9UPZ9 632 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 ZNF711Q9Y462 761 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 FAM215AQ9Y5M1 114 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 USF3Q68DE3 2245 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 ZNF407Q9C0G0 2248 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 LOC102723996A0A087X1L8 192 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 A0A0G2JK05 382 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 FAM237AA0A1B0GTK4 181 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 HS6ST1O60243 411 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 PRPSAP2O60256 369 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 NME2P1O60361 137 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 SLC25A12O75746 678 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 PDE9AO76083 593 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 SUN1O94901 812 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 CYP1A1P04798 512 aaPredicted RBP11.24□□□□□ -0.61
USP11-208ENST00000480104 NME2P22392 152 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 ACVR2AP27037 513 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 NR0B1P51843 470 aaKnown RBP11.24□□□□□ -0.61
USP11-208ENST00000480104 GSCP56915 257 aaPredicted RBP11.24□□□□□ -0.61
USP11-208ENST00000480104 RPL7AP62424 266 aaKnown RBP11.24□□□□□ -0.61
USP11-208ENST00000480104 PRKG2Q13237 762 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 GRM7Q14831 915 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 YOD1Q5VVQ6 348 aaPredicted RBP11.24□□□□□ -0.61
USP11-208ENST00000480104 HIST2H2BDQ6DRA6 164 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 LGI4Q8N135 537 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 MAPK1IP1LQ8NDC0 245 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 PHC3Q8NDX5 983 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 OR5M9Q8NGP3 310 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 OR2L2Q8NH16 312 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 RNF25Q96BH1 459 aaPredicted RBP11.24□□□□□ -0.61
USP11-208ENST00000480104 DHTKD1Q96HY7 919 aaPredicted RBP11.24□□□□□ -0.61
USP11-208ENST00000480104 SH3GL2Q99962 352 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 GPR63Q9BZJ6 419 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 ZNF304Q9HCX3 659 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 PLSCR2Q9NRY7 297 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 PNPLA3Q9NST1 481 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 KLHL20Q9Y2M5 609 aa11.24□□□□□ -0.61
USP11-208ENST00000480104 RYR3Q15413 4870 aa11.23□□□□□ -0.61
USP11-208ENST00000480104 IGLV3-12A0A075B6K2 115 aa11.23□□□□□ -0.61
USP11-208ENST00000480104 SIGLEC16A6NMB1 481 aa11.23□□□□□ -0.61
USP11-208ENST00000480104 GABRR3A8MPY1 467 aa11.23□□□□□ -0.61
USP11-208ENST00000480104 FFAR3O14843 346 aa11.23□□□□□ -0.61
USP11-208ENST00000480104 GPR42O15529 346 aa11.23□□□□□ -0.61
USP11-208ENST00000480104 CHRM5P08912 532 aaPredicted RBP11.23□□□□□ -0.61
USP11-208ENST00000480104 FAM157CP0CG43 387 aa11.23□□□□□ -0.61
USP11-208ENST00000480104 OGDHQ02218 1023 aa11.23□□□□□ -0.61
USP11-208ENST00000480104 STIM1Q13586 685 aa11.23□□□□□ -0.61
USP11-208ENST00000480104 LDLRAP1Q5SW96 308 aa11.23□□□□□ -0.61
USP11-208ENST00000480104 ERMARDQ5T6L9 678 aa11.23□□□□□ -0.61
USP11-208ENST00000480104 KIAA0930Q6ICG6 404 aaPredicted RBP11.23□□□□□ -0.61
USP11-208ENST00000480104 TMCO3Q6UWJ1 677 aa11.23□□□□□ -0.61
USP11-208ENST00000480104 B3GNT6Q6ZMB0 384 aa11.23□□□□□ -0.61
USP11-208ENST00000480104 HORMAD2Q8N7B1 307 aa11.23□□□□□ -0.61
USP11-208ENST00000480104 DDHD1Q8NEL9 900 aa11.23□□□□□ -0.61
USP11-208ENST00000480104 ROBO4Q8WZ75 1007 aa11.23□□□□□ -0.61
USP11-208ENST00000480104 RNASE6Q93091 150 aaKnown RBP11.23□□□□□ -0.61
USP11-208ENST00000480104 PIGTQ969N2 578 aa11.23□□□□□ -0.61
USP11-208ENST00000480104 YIPF4Q9BSR8 244 aa11.23□□□□□ -0.61
USP11-208ENST00000480104 TUBB6Q9BUF5 446 aa11.23□□□□□ -0.61
USP11-208ENST00000480104 GOLPH3LQ9H4A5 285 aa11.23□□□□□ -0.61
USP11-208ENST00000480104 BPIFA1Q9NP55 256 aa11.23□□□□□ -0.61
USP11-208ENST00000480104 PCSK1NQ9UHG2 260 aa11.23□□□□□ -0.61
USP11-208ENST00000480104 TUBAL3A6NHL2 446 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 NPIPA2E9PIF3 369 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 NPIPA3F8WFD2 350 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 UGT1A9O60656 530 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 SNRNP200O75643 2136 aaKnown RBP11.22□□□□□ -0.61
USP11-208ENST00000480104 SEC24DO94855 1032 aaPredicted RBP11.22□□□□□ -0.61
USP11-208ENST00000480104 HEXBP07686 556 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 UGT1A6P19224 532 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 MAGP20916 626 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 FBLP22087 321 aaKnown RBP11.22□□□□□ -0.61
USP11-208ENST00000480104 AMPD1P23109 780 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 CES1P23141 567 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 FMO1Q01740 532 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 MESDQ14696 234 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 MEP1AQ16819 746 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 LONRF2Q1L5Z9 754 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 BTBD16Q32M84 506 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 GXYLT1Q4G148 440 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 RTL6Q6ICC9 239 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 H3F3CQ6NXT2 135 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 DNAJC24Q6P3W2 148 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 UNC5AQ6ZN44 842 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms