RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 GPAT4Q86UL3 456 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 FAM72BQ86X60 149 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 CLHC1Q8NHS4 586 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 PABPC5Q96DU9 382 aaKnown RBP20.73■□□□□ 0.91
SDF4-206ENST00000478938 ASIC4Q96FT7 647 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 TTPALQ9BTX7 342 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 COA1Q9GZY4 146 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 TRHDEQ9UKU6 1024 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 ABCG2Q9UNQ0 655 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 CLCA3PQ9Y6N3 262 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 NUP205Q92621 2012 aa20.72■□□□□ 0.91
SDF4-206ENST00000478938 UBA6A0AVT1 1052 aaPredicted RBP20.72■□□□□ 0.91
SDF4-206ENST00000478938 PRDX3P30048 256 aaKnown RBP20.72■□□□□ 0.91
SDF4-206ENST00000478938 SSTR4P31391 388 aa20.72■□□□□ 0.91
SDF4-206ENST00000478938 CCT3P49368 545 aaKnown RBP20.72■□□□□ 0.91
SDF4-206ENST00000478938 MAB21L1Q13394 359 aa20.72■□□□□ 0.91
SDF4-206ENST00000478938 TOR1AIP1Q5JTV8 583 aa20.72■□□□□ 0.91
SDF4-206ENST00000478938 ZNF648Q5T619 568 aaPredicted RBP20.72■□□□□ 0.91
SDF4-206ENST00000478938 PLET1Q6UQ28 207 aa20.72■□□□□ 0.91
SDF4-206ENST00000478938 DGLUCYQ7Z3D6 616 aa20.72■□□□□ 0.91
SDF4-206ENST00000478938 LDB1Q86U70 411 aaPredicted RBP20.72■□□□□ 0.91
SDF4-206ENST00000478938 IPMKQ8NFU5 416 aa20.72■□□□□ 0.91
SDF4-206ENST00000478938 SLC35F5Q8WV83 523 aa20.72■□□□□ 0.91
SDF4-206ENST00000478938 RIMKLBQ9ULI2 386 aa20.72■□□□□ 0.91
SDF4-206ENST00000478938 MYLKQ15746 1914 aa20.72■□□□□ 0.91
SDF4-206ENST00000478938 ASB14A6NK59 587 aa20.72■□□□□ 0.91
SDF4-206ENST00000478938 F9P00740 461 aa20.72■□□□□ 0.91
SDF4-206ENST00000478938 CDK1P06493 297 aa20.72■□□□□ 0.91
SDF4-206ENST00000478938 RPS19P39019 145 aaKnown RBP20.72■□□□□ 0.91
SDF4-206ENST00000478938 CHRNA4P43681 627 aa20.72■□□□□ 0.91
SDF4-206ENST00000478938 SULT1E1P49888 294 aa20.72■□□□□ 0.91
SDF4-206ENST00000478938 KCNQ1P51787 676 aa20.72■□□□□ 0.91
SDF4-206ENST00000478938 AADATQ8N5Z0 425 aa20.72■□□□□ 0.91
SDF4-206ENST00000478938 PPHLN1Q8NEY8 458 aaKnown RBP20.72■□□□□ 0.91
SDF4-206ENST00000478938 GGHQ92820 318 aa20.72■□□□□ 0.91
SDF4-206ENST00000478938 GPRASP2Q96D09 838 aa20.72■□□□□ 0.91
SDF4-206ENST00000478938 GPR137Q96N19 417 aa20.72■□□□□ 0.91
SDF4-206ENST00000478938 CNPPD1Q9BV87 410 aa20.72■□□□□ 0.91
SDF4-206ENST00000478938 NIFKQ9BYG3 293 aaKnown RBP20.72■□□□□ 0.91
SDF4-206ENST00000478938 SERHL2Q9H4I8 314 aa20.72■□□□□ 0.91
SDF4-206ENST00000478938 SLC35C2Q9NQQ7 365 aa20.72■□□□□ 0.91
SDF4-206ENST00000478938 MRPL39Q9NYK5 338 aaKnown RBP20.72■□□□□ 0.91
SDF4-206ENST00000478938 ZNF175Q9Y473 711 aa20.72■□□□□ 0.91
SDF4-206ENST00000478938 EP400Q96L91 3159 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 H3BM21 787 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 ARVCFO00192 962 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 VPS4BO75351 444 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 PMPCBO75439 489 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 ERCC2P18074 760 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 NFKB2Q00653 900 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 TSTQ16762 297 aaKnown RBP20.71■□□□□ 0.91
SDF4-206ENST00000478938 PKDCCQ504Y2 493 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 ABHD15Q6UXT9 468 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 TAGAPQ8N103 731 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 KLHL15Q96M94 604 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 TMEM209Q96SK2 561 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 NT5C1AQ9BXI3 368 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 GALNT9Q9HCQ5 603 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 DCAF13Q9NV06 445 aaKnown RBP20.71■□□□□ 0.91
SDF4-206ENST00000478938 PDP1Q9P0J1 537 aaPredicted RBP20.71■□□□□ 0.91
SDF4-206ENST00000478938 ELOVL7A1L3X0 281 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 MUSKO15146 869 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 ZNF254O75437 659 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 RFPL3O75679 317 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 COL2A1P02458 1487 aaPredicted RBP20.71■□□□□ 0.91
SDF4-206ENST00000478938 PROS1P07225 676 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 GPR85P60893 370 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 MRPL28Q13084 256 aaKnown RBP20.71■□□□□ 0.91
SDF4-206ENST00000478938 PWP1Q13610 501 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 NADSYN1Q6IA69 706 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 ANKRD54Q6NXT1 300 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 ZNF782Q6ZMW2 699 aaPredicted RBP20.71■□□□□ 0.91
SDF4-206ENST00000478938 ABI3BPQ7Z7G0 1075 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 ZDHHC21Q8IVQ6 265 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 FAM217AQ8IXS0 508 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 RAET1EQ8TD07 263 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 SIPA1Q96FS4 1042 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 HPDLQ96IR7 371 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 GJD4Q96KN9 370 aaPredicted RBP20.71■□□□□ 0.91
SDF4-206ENST00000478938 FAM129BQ96TA1 746 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 QTRT2Q9H974 415 aaKnown RBP20.71■□□□□ 0.91
SDF4-206ENST00000478938 IL1RAPQ9NPH3 570 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 KRT84Q9NSB2 600 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 ZIM2Q9NZV7 527 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 KIF17Q9P2E2 1029 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 FEM1BQ9UK73 627 aa20.71■□□□□ 0.91
SDF4-206ENST00000478938 RPS10-NUDT3A0A1W2PQS6 291 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 MYL12BO14950 172 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 GPX5O75715 221 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 RGS20O76081 388 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 MYL12AP19105 171 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 PSPHP78330 225 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 GRIK2Q13002 908 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 KYAT1Q16773 422 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.7■□□□□ 0.96e-7■□□□□ 11.1
SDF4-206ENST00000478938 EEF1DP3Q658K8 133 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 NETO1Q8TDF5 533 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 MYDGFQ969H8 173 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 HYLS1Q96M11 299 aa20.7■□□□□ 0.9
SDF4-206ENST00000478938 C1QTNF6Q9BXI9 259 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms