RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 Q8NA96 180 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 NCSTNQ92542 709 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 EID2BQ96D98 161 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 MFSD3Q96ES6 412 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 SCRN2Q96FV2 425 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 TEFMQ96QE5 360 aaKnown RBP4.5□□□□□ -1.69
CKS1B-207ENST00000477676 OR2M4Q96R27 311 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 MGME1Q9BQP7 344 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 SELENOOQ9BVL4 669 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 RIOK2Q9BVS4 552 aaKnown RBP4.5□□□□□ -1.69
CKS1B-207ENST00000477676 CINPQ9BW66 212 aaPredicted RBP4.5□□□□□ -1.69
CKS1B-207ENST00000477676 DHX35Q9H5Z1 703 aaKnown RBP4.5□□□□□ -1.69
CKS1B-207ENST00000477676 CATSPERBQ9H7T0 1116 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 ARFGAP3Q9NP61 516 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 SARS2Q9NP81 518 aaKnown RBP4.5□□□□□ -1.69
CKS1B-207ENST00000477676 FAM207AQ9NSI2 230 aaPredicted RBP4.5□□□□□ -1.69
CKS1B-207ENST00000477676 AKAP7Q9P0M2 348 aaPredicted RBP4.5□□□□□ -1.69
CKS1B-207ENST00000477676 SLC23A2Q9UGH3 650 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 PCSK1NQ9UHG2 260 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 KCNK6Q9Y257 313 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 AKAP6Q13023 2319 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 ACANP16112 2415 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 A0A0A6YYK5 440 aaPredicted RBP4.49□□□□□ -1.69
CKS1B-207ENST00000477676 GOLGA6CA6NDK9 693 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 GOLGA6BA6NDN3 693 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 GOLGA6L3A6NEY3 463 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 WIPF3A6NGB9 483 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 PSMD11O00231 422 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 PES1O00541 588 aaKnown RBP4.49□□□□□ -1.69
CKS1B-207ENST00000477676 POLR1CO15160 346 aaPredicted RBP4.49□□□□□ -1.69
CKS1B-207ENST00000477676 INPP4BO15327 924 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 HOXA3O43365 443 aaPredicted RBP4.49□□□□□ -1.69
CKS1B-207ENST00000477676 SOCS5O75159 536 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 LRCH4O75427 683 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 KIAA0754O94854 1291 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 SORBS2O94875 1100 aaKnown RBP4.49□□□□□ -1.69
CKS1B-207ENST00000477676 AGFG2O95081 481 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 PGLSO95336 258 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 GOLGA6DP0CG33 693 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 BRAFP15056 766 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 CPEP16870 476 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 TYRP1P17643 537 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 HK1P19367 917 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 MIPP30301 263 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 DCTP40126 519 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 GPR1P46091 355 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 NSFP46459 744 aaKnown RBP4.49□□□□□ -1.69
CKS1B-207ENST00000477676 LEPRP48357 1165 aaKnown RBP4.49□□□□□ -1.69
CKS1B-207ENST00000477676 MASP1P48740 699 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 MECP2P51608 486 aaKnown RBP4.49□□□□□ -1.69
CKS1B-207ENST00000477676 STC1P52823 247 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 PMS2P54278 862 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 AIF1P55008 147 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 RPS18P62269 152 aaKnown RBP4.49□□□□□ -1.69
CKS1B-207ENST00000477676 POLR2LP62875 67 aaKnown RBP4.49□□□□□ -1.69
CKS1B-207ENST00000477676 ADAM8P78325 824 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 CHAF1BQ13112 559 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 MRPL49Q13405 166 aaKnown RBP4.49□□□□□ -1.69
CKS1B-207ENST00000477676 MAMLD1Q13495 774 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 IL10RAQ13651 578 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 RFTN1Q14699 578 aaPredicted RBP4.49□□□□□ -1.69
CKS1B-207ENST00000477676 EIF2S3LQ2VIR3 472 aaKnown RBP4.49□□□□□ -1.69
CKS1B-207ENST00000477676 KHDC1Q4VXA5 237 aaKnown RBP4.49□□□□□ -1.69
CKS1B-207ENST00000477676 PPP6R3Q5H9R7 873 aaPredicted RBP4.49□□□□□ -1.69
CKS1B-207ENST00000477676 ERMARDQ5T6L9 678 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 HENMT1Q5T8I9 393 aaKnown RBP4.49□□□□□ -1.69
CKS1B-207ENST00000477676 FAM69BQ5VUD6 431 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 PLEKHA7Q6IQ23 1121 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 DNAJC24Q6P3W2 148 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 FAM199XQ6PEV8 388 aaPredicted RBP4.49□□□□□ -1.69
CKS1B-207ENST00000477676 CERS6Q6ZMG9 384 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 TRIM72Q6ZMU5 477 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 RFX8Q6ZV50 586 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 APTXQ7Z2E3 356 aaKnown RBP4.49□□□□□ -1.69
CKS1B-207ENST00000477676 IRF2BP2Q7Z5L9 587 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 CCDC13Q8IYE1 715 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 MCOLN2Q8IZK6 566 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 TEX19Q8NA77 164 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 MLKLQ8NB16 471 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 MSANTD4Q8NCY6 345 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 CCDC112Q8NEF3 446 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 SSC4DQ8WTU2 575 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 CT55Q8WUE5 264 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 PDCD6IPQ8WUM4 868 aaKnown RBP4.49□□□□□ -1.69
CKS1B-207ENST00000477676 CHAC2Q8WUX2 184 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 AP2M1Q96CW1 435 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 C9orf72Q96LT7 481 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 NUDCD1Q96RS6 583 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 AGPAT1Q99943 283 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 MLXIPLQ9NP71 852 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 PRDM8Q9NQV8 689 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 DDX56Q9NY93 547 aaKnown RBP4.49□□□□□ -1.69
CKS1B-207ENST00000477676 GOLGA6AQ9NYA3 693 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 ZNF624Q9P2J8 865 aaPredicted RBP4.49□□□□□ -1.69
CKS1B-207ENST00000477676 RCOR3Q9P2K3 495 aaPredicted RBP4.49□□□□□ -1.69
CKS1B-207ENST00000477676 CPNE7Q9UBL6 633 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 MCM8Q9UJA3 840 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 KCND3Q9UK17 655 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 TMPRSS11EQ9UL52 423 aa4.49□□□□□ -1.69
CKS1B-207ENST00000477676 PHTF1Q9UMS5 762 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms