RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 H2AFYO75367 372 aaKnown RBP12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 PGRP06401 933 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 KCNA5P22460 613 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 KDELR1P24390 212 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 MYL9P24844 172 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 IL1R2P27930 398 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 SDC4P31431 198 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 BMP8BP34820 402 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 SHMT2P34897 504 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 SCNN1AP37088 669 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 ELK3P41970 407 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 CYP27C1Q4G0S4 372 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 RAP1GAP2Q684P5 730 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 FUT10Q6P4F1 479 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 BMP8AQ7Z5Y6 402 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 SNX20Q7Z614 316 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 LUZP2Q86TE4 346 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 KRT73Q86Y46 540 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 MIB1Q86YT6 1006 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 VWA5B2Q8N398 1253 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 CHDHQ8NE62 594 aaPredicted RBP12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 TUBGCP3Q96CW5 907 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 MYRFLQ96LU7 910 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 ZFP42Q96MM3 310 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 FRMD6Q96NE9 622 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 NEDD4LQ96PU5 975 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 DPYSL5Q9BPU6 564 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 SLC22A4Q9H015 551 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 TRMT13Q9NUP7 481 aaKnown RBP12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 DCDC2Q9UHG0 476 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 PCDHB3Q9Y5E6 796 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 SLC22A7Q9Y694 548 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 TMEM238LA0A1B0GVL6 79 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 EFCAB9A8MZ26 197 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 DPYSL4O14531 572 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 MRPS14O60783 128 aaKnown RBP12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 TSC22D2O75157 780 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 SOAT2O75908 522 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 PDE9AO76083 593 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 IPO13O94829 963 aaKnown RBP12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 TRUB2O95900 331 aaKnown RBP12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 GLAP06280 429 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 CPN2P22792 545 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 ALDH4A1P30038 563 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 CLCN4P51793 760 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 LSM3P62310 102 aaKnown RBP12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 EMX1Q04741 257 aaPredicted RBP12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 MICAQ29983 383 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 ARMCX4Q5H9R4 360 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 ANKRD22Q5VYY1 191 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 TXNRD3NBQ6F5E7 133 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 LRRC8EQ6NSJ5 796 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 TXNDC11Q6PKC3 985 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 CCDC190Q86UF4 302 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 CMTR2Q8IYT2 770 aaKnown RBP12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 DCP1BQ8IZD4 617 aaKnown RBP12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 CLEC4FQ8N1N0 589 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 TMEM86AQ8N2M4 240 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 ZNF557Q8N988 423 aaPredicted RBP12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 B3GALNT2Q8NCR0 500 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 WNT8BQ93098 351 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 HDAC10Q969S8 669 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 KIAA1191Q96A73 305 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 GPR63Q9BZJ6 419 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 ESRP2Q9H6T0 727 aaKnown RBP12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 RSAD1Q9HA92 442 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 PADI3Q9ULW8 664 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 NME7Q9Y5B8 376 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 CHURC1-FNTBB4DL54 471 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 SGK1O00141 431 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 PIK3R2O00459 728 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 APBB3O95704 486 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 LMO2P25791 158 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 ADORA2BP29275 332 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 RFC2P35250 354 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 TIE1P35590 1138 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 LHX1P48742 406 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 KCNK10P57789 538 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 MAB21L1Q13394 359 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 GPR68Q15743 365 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 TAZQ16635 292 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 SMTNL2Q2TAL5 461 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 KDM4DQ6B0I6 523 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 FAM109BQ6ICB4 259 aaPredicted RBP12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 FAM45BPQ6NSW5 357 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 ARFGAP1Q8N6T3 406 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 FAM45AQ8TCE6 357 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 DEPDC1BQ8WUY9 529 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 IPCEF1Q8WWN9 437 aaPredicted RBP12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 GTF3AQ92664 365 aaKnown RBP12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 NXPE2Q96DL1 559 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 MRPL48Q96GC5 212 aaKnown RBP12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 SDHCQ99643 169 aaPredicted RBP12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 NPAS2Q99743 824 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 DNAJC11Q9NVH1 559 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 CUEDC1Q9NWM3 386 aaPredicted RBP12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 NDRG3Q9UGV2 375 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 TRPS1Q9UHF7 1281 aa12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 INTS6Q9UL03 887 aaKnown RBP12.36□□□□□ -0.43
RTFDC1-207ENST00000477573 EMCNQ9ULC0 261 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms