RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 GET4Q7L5D6 327 aaPredicted RBP14.27□□□□□ -0.12
HDAC6-220ENST00000477528 SLCO6A1Q86UG4 719 aa14.27□□□□□ -0.12
HDAC6-220ENST00000477528 RGL4Q8IZJ4 473 aa14.27□□□□□ -0.12
HDAC6-220ENST00000477528 FATE1Q969F0 183 aa14.27□□□□□ -0.12
HDAC6-220ENST00000477528 NDEL1Q9GZM8 345 aa14.27□□□□□ -0.12
HDAC6-220ENST00000477528 PCBD2Q9H0N5 130 aa14.27□□□□□ -0.12
HDAC6-220ENST00000477528 SMG9Q9H0W8 520 aaKnown RBP14.27□□□□□ -0.12
HDAC6-220ENST00000477528 MAFFQ9ULX9 164 aa14.27□□□□□ -0.12
HDAC6-220ENST00000477528 CITO14578 2027 aa14.27□□□□□ -0.12
HDAC6-220ENST00000477528 RGS1Q08116 209 aa14.27□□□□□ -0.12
HDAC6-220ENST00000477528 PTGR1Q14914 329 aa14.27□□□□□ -0.12
HDAC6-220ENST00000477528 HEPACAMQ14CZ8 416 aa14.27□□□□□ -0.12
HDAC6-220ENST00000477528 AGTRAPQ6RW13 159 aa14.27□□□□□ -0.12
HDAC6-220ENST00000477528 FAM92BQ6ZTR7 304 aa14.27□□□□□ -0.12
HDAC6-220ENST00000477528 C1orf52Q8N6N3 182 aaKnown RBP14.27□□□□□ -0.12
HDAC6-220ENST00000477528 ANKFN1Q8N957 763 aa14.27□□□□□ -0.12
HDAC6-220ENST00000477528 TMEM245Q9H330 911 aa14.27□□□□□ -0.12
HDAC6-220ENST00000477528 FAM120CQ9NX05 1096 aaKnown RBP14.27□□□□□ -0.12
HDAC6-220ENST00000477528 SEC14L3Q9UDX4 400 aa14.27□□□□□ -0.12
HDAC6-220ENST00000477528 RSL1D1O76021 490 aaKnown RBP14.27□□□□□ -0.13
HDAC6-220ENST00000477528 C7P10643 843 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 DBTP11182 482 aaKnown RBP14.27□□□□□ -0.13
HDAC6-220ENST00000477528 IDSP22304 550 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 KELP23276 732 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 HTR1BP28222 390 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 SLBPQ14493 270 aaKnown RBP eCLIP14.27□□□□□ -0.13
HDAC6-220ENST00000477528 TEAD2Q15562 447 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 HKDC1Q2TB90 917 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 ARMC4Q5T2S8 1044 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 LCN8Q6JVE9 175 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 PDE12Q6L8Q7 609 aaKnown RBP14.27□□□□□ -0.13
HDAC6-220ENST00000477528 NEK5Q6P3R8 708 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 ZFAND4Q86XD8 727 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 ZFYVE19Q96K21 471 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 IL17CQ9P0M4 197 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 OGDHLQ9ULD0 1010 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 ERVW-1Q9UQF0 538 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 URADA6NGE7 173 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 A6NHS1 94 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 CBFA2T3O75081 653 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 DNTTP04053 509 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 STK19P49842 368 aaPredicted RBP14.27□□□□□ -0.13
HDAC6-220ENST00000477528 GALK1P51570 392 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 MYBPC3Q14896 1274 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 ABRAXAS2Q15018 415 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 SH2D5Q6ZV89 423 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 CD200R1Q8TD46 325 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 ZNF347Q96SE7 839 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 HERC2P3Q9BVR0 1158 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 AASDHPPTQ9NRN7 309 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 TESMINQ9Y4I5 508 aa14.27□□□□□ -0.13
HDAC6-220ENST00000477528 MROH6A6NGR9 719 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 SRPRAP08240 638 aaKnown RBP14.26□□□□□ -0.13
HDAC6-220ENST00000477528 BUD31P41223 144 aaPredicted RBP14.26□□□□□ -0.13
HDAC6-220ENST00000477528 MAGEA10P43363 369 aaPredicted RBP14.26□□□□□ -0.13
HDAC6-220ENST00000477528 PGM2L1Q6PCE3 622 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 OR52J3Q8NH60 311 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 ZFAND2BQ8WV99 257 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 IRF7Q92985 503 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 NACC2Q96BF6 587 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 MCMBPQ9BTE3 642 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 C1QTNF1Q9BXJ1 281 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 C11orf49Q9H6J7 331 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 WNT6Q9Y6F9 365 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 LINC00854A0A1B0GVQ3 168 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 SLC16A5O15375 505 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 ZW10O43264 779 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 PABPC4LP0CB38 370 aaKnown RBP14.26□□□□□ -0.13
HDAC6-220ENST00000477528 ADH5P11766 374 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 DNAJA1P31689 397 aaKnown RBP14.26□□□□□ -0.13
HDAC6-220ENST00000477528 CDKN1CP49918 316 aaPredicted RBP14.26□□□□□ -0.13
HDAC6-220ENST00000477528 CDH12P55289 794 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 MRPL28Q13084 256 aaKnown RBP14.26□□□□□ -0.13
HDAC6-220ENST00000477528 LY6G5CQ5SRR4 150 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 OR2T5Q6IEZ7 315 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 DPY19L3Q6ZPD9 716 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 LARP4Q71RC2 724 aaKnown RBP eCLIP14.26□□□□□ -0.137e-7■■■■■ 35.5
HDAC6-220ENST00000477528 MAVSQ7Z434 540 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 AMZ2Q86W34 360 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 APCDD1Q8J025 514 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 TEX26Q8N6G2 289 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 KLHDC9Q8NEP7 349 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 MDGA1Q8NFP4 955 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 OR2T29Q8NH02 315 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 PYURFQ96I23 114 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 UBXN10Q96LJ8 280 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 SLC38A2Q96QD8 506 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 TRIM8Q9BZR9 551 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 C3orf14Q9HBI5 128 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 ZDHHC7Q9NXF8 308 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 ADAM30Q9UKF2 790 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 ZNF780BQ9Y6R6 833 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 NME4O00746 187 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 RPS17P08708 135 aaKnown RBP14.26□□□□□ -0.13
HDAC6-220ENST00000477528 MPC1LP0DKB6 136 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 CAPN3P20807 821 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 CSNK2BP67870 215 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 Q6ZVL8 140 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 PARP8Q8N3A8 854 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 EXOSC8Q96B26 276 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms