RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	ARHGEF39	Q8N4T4	335 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	GDPD1	Q8N9F7	314 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520		Q8N9G6	341 aa	Predicted RBP	4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	APPL2	Q8NEU8	664 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	SLC22A8	Q8TCC7	542 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	RASGRP4	Q8TDF6	673 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	ACER1	Q8TDN7	264 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	TAS1R2	Q8TE23	839 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	SLC22A17	Q8WUG5	538 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	SLC20A1	Q8WUM9	679 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	ZFPM2	Q8WW38	1151 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	SLC13A3	Q8WWT9	602 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	DEDD2	Q8WXF8	326 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	KIAA1143	Q96AT1	154 aa	Predicted RBP	4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	SLCO4A1	Q96BD0	722 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	TESC	Q96BS2	214 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	NXPE2	Q96DL1	559 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	LGALS12	Q96DT0	336 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	CCDC126	Q96EE4	140 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	ZHX1-C8orf76	Q96EF9	292 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	SGTB	Q96EQ0	304 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	HSFY1	Q96LI6	401 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	C12orf42	Q96LP6	360 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	C1orf74	Q96LT6	269 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	ZNF778	Q96MU6	729 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	SERPINB11	Q96P15	392 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	ZNF300	Q96RE9	604 aa	Predicted RBP	4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	FERD3L	Q96RJ6	166 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	KLF6	Q99612	283 aa	Predicted RBP	4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	EBNA1BP2	Q99848	306 aa	Known RBP	4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	TMEM47	Q9BQJ4	181 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	REEP2	Q9BRK0	252 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	SPON2	Q9BUD6	331 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	MECR	Q9BV79	373 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	KATNAL1	Q9BW62	490 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	HEMGN	Q9BXL5	484 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	UGT2B28	Q9BY64	529 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	SLC19A3	Q9BZV2	496 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	C20orf27	Q9GZN8	174 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	PITHD1	Q9GZP4	211 aa	Predicted RBP	4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	NAA50	Q9GZZ1	169 aa	Known RBP	4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	SLC22A4	Q9H015	551 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	TMEM117	Q9H0C3	514 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	FAM49A	Q9H0Q0	323 aa	Predicted RBP	4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	SEMA6A	Q9H2E6	1030 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	ST6GALNAC4	Q9H4F1	302 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	RANBP3	Q9H6Z4	567 aa	Predicted RBP	4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	CAB39L	Q9H9S4	337 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	RSAD1	Q9HA92	442 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	NTN4	Q9HB63	628 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	TMEM8A	Q9HCN3	771 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	FANCF	Q9NPI8	374 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	GPRC5C	Q9NQ84	441 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	DYRK4	Q9NR20	520 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	POLE3	Q9NRF9	147 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	SNX15	Q9NRS6	342 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	AGPAT3	Q9NRZ7	376 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	ADPRHL2	Q9NX46	363 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	EHD3	Q9NZN3	535 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	ABCD2	Q9UBJ2	740 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	FBXO40	Q9UH90	709 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	C3orf18	Q9UK00	162 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	RAB23	Q9ULC3	237 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	STUB1	Q9UNE7	303 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	FZD1	Q9UP38	647 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	USP22	Q9UPT9	525 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	KCNK7	Q9Y2U2	307 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	PCDHGB6	Q9Y5F9	930 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	PCDHGA8	Q9Y5G5	932 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	RNF215	Q9Y6U7	377 aa		4.61	□□□□□ -1.67
PTCD3-212	ENST00000477520	PTPRF	P10586	1907 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	OTOF	Q9HC10	1997 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	CCL15-CCL14	A0A0B4J2E2	113 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520		A0A1B0GW55	424 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	ATP6AP2	A0A1C7CYW4	349 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	FAM92A	A1XBS5	289 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	MEIOC	A2RUB1	952 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	CCDC182	A6NF36	153 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	TMEM191C	A6NGB0	347 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	PLOD2	O00469	737 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	KPNA3	O00505	521 aa	Predicted RBP	4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	SLC16A6	O15403	523 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	SEC14L5	O43304	696 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	TBX1	O43435	398 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	FOXS1	O43638	330 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	NARS	O43776	548 aa	Known RBP	4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	NRP2	O60462	931 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	PLA2G6	O60733	806 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	TSC22D2	O75157	780 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	TIPRL	O75663	272 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	RFPL3	O75679	317 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	CYP7B1	O75881	506 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	SLC22A5	O76082	557 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	SORBS2	O94875	1100 aa	Known RBP	4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	SOX30	O94993	753 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	SEMA3D	O95025	777 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	PRSS23	O95084	383 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	KCNH1	O95259	989 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	TDP2	O95551	362 aa		4.6	□□□□□ -1.67

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