RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 SLC19A1P41440 591 aa16.4■□□□□ 0.22
EPHB4-204ENST00000477446 NAGLUP54802 743 aa16.4■□□□□ 0.22
EPHB4-204ENST00000477446 ALDH18A1P54886 795 aaKnown RBP16.4■□□□□ 0.22
EPHB4-204ENST00000477446 GALNT1Q10472 559 aaPredicted RBP16.4■□□□□ 0.22
EPHB4-204ENST00000477446 TECRLQ5HYJ1 363 aa16.4■□□□□ 0.22
EPHB4-204ENST00000477446 TMEM207Q6UWW9 146 aa16.4■□□□□ 0.22
EPHB4-204ENST00000477446 PIP4P1Q86T03 277 aa16.4■□□□□ 0.22
EPHB4-204ENST00000477446 ARL14Q8N4G2 192 aa16.4■□□□□ 0.22
EPHB4-204ENST00000477446 ZNF781Q8N8C0 355 aa16.4■□□□□ 0.22
EPHB4-204ENST00000477446 BAHD1Q8TBE0 780 aaPredicted RBP16.4■□□□□ 0.22
EPHB4-204ENST00000477446 MAPK15Q8TD08 544 aa16.4■□□□□ 0.22
EPHB4-204ENST00000477446 MCUR1Q96AQ8 359 aa16.4■□□□□ 0.22
EPHB4-204ENST00000477446 FAR2Q96K12 515 aa16.4■□□□□ 0.22
EPHB4-204ENST00000477446 CADM1Q9BY67 442 aaKnown RBP16.4■□□□□ 0.22
EPHB4-204ENST00000477446 TSR3Q9UJK0 312 aaKnown RBP16.4■□□□□ 0.22
EPHB4-204ENST00000477446 PRAMEF33A0A0G2JMD5 474 aa16.39■□□□□ 0.21
EPHB4-204ENST00000477446 B2RBV5 119 aa16.39■□□□□ 0.21
EPHB4-204ENST00000477446 MATN2O00339 956 aa16.39■□□□□ 0.21
EPHB4-204ENST00000477446 IFRD1O00458 451 aaPredicted RBP16.39■□□□□ 0.21
EPHB4-204ENST00000477446 SLC22A2O15244 555 aa16.39■□□□□ 0.21
EPHB4-204ENST00000477446 WISP3O95389 354 aaPredicted RBP16.39■□□□□ 0.21
EPHB4-204ENST00000477446 LDOC1O95751 146 aaPredicted RBP16.39■□□□□ 0.21
EPHB4-204ENST00000477446 CBSLP0DN79 551 aa16.39■□□□□ 0.21
EPHB4-204ENST00000477446 CBSP35520 551 aa16.39■□□□□ 0.21
EPHB4-204ENST00000477446 GLRBP48167 497 aa16.39■□□□□ 0.21
EPHB4-204ENST00000477446 DLG1Q12959 904 aa16.39■□□□□ 0.21
EPHB4-204ENST00000477446 ABRQ12979 859 aa16.39■□□□□ 0.21
EPHB4-204ENST00000477446 CSHL1Q14406 222 aa16.39■□□□□ 0.21
EPHB4-204ENST00000477446 NR0B2Q15466 257 aa16.39■□□□□ 0.21
EPHB4-204ENST00000477446 AFAP1L2Q8N4X5 818 aa16.39■□□□□ 0.21
EPHB4-204ENST00000477446 FAM13CQ8NE31 585 aa16.39■□□□□ 0.21
EPHB4-204ENST00000477446 EEF1AKMT1Q8WVE0 214 aa16.39■□□□□ 0.21
EPHB4-204ENST00000477446 TFGQ92734 400 aaPredicted RBP16.39■□□□□ 0.21
EPHB4-204ENST00000477446 CMTM5Q96DZ9 223 aa16.39■□□□□ 0.21
EPHB4-204ENST00000477446 CNDP2Q96KP4 475 aaKnown RBP16.39■□□□□ 0.21
EPHB4-204ENST00000477446 CCDC28BQ9BUN5 200 aa16.39■□□□□ 0.21
EPHB4-204ENST00000477446 EML4Q9HC35 981 aaKnown RBP16.39■□□□□ 0.21
EPHB4-204ENST00000477446 SYTL2Q9HCH5 934 aa16.39■□□□□ 0.21
EPHB4-204ENST00000477446 IMP3Q9NV31 184 aaKnown RBP16.39■□□□□ 0.21
EPHB4-204ENST00000477446 ARMCX1Q9P291 453 aa16.39■□□□□ 0.21
EPHB4-204ENST00000477446 CPNE7Q9UBL6 633 aa16.39■□□□□ 0.21
EPHB4-204ENST00000477446 FTSJ1Q9UET6 329 aa16.39■□□□□ 0.21
EPHB4-204ENST00000477446 PADI4Q9UM07 663 aa16.39■□□□□ 0.21
EPHB4-204ENST00000477446 DMXL1Q9Y485 3027 aa16.39■□□□□ 0.21
EPHB4-204ENST00000477446 CCDC189A1A4V9 331 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 TM4SF5O14894 197 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 DIAPH2O60879 1101 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 ENO1P06733 434 aaKnown RBP16.38■□□□□ 0.21
EPHB4-204ENST00000477446 CCDC166P0CW27 439 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 MTHFD1P11586 935 aaKnown RBP16.38■□□□□ 0.21
EPHB4-204ENST00000477446 ZNF37AP17032 561 aaPredicted RBP16.38■□□□□ 0.21
EPHB4-204ENST00000477446 TFEBP19484 476 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 RPIAP49247 311 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 IL2P60568 153 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 UBE2IP63279 158 aaKnown RBP16.38■□□□□ 0.21
EPHB4-204ENST00000477446 ARL13AQ5H913 290 aaPredicted RBP16.38■□□□□ 0.21
EPHB4-204ENST00000477446 DUS1LQ6P1R4 473 aaKnown RBP16.38■□□□□ 0.21
EPHB4-204ENST00000477446 CYHR1Q6ZMK1 362 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 RINLQ6ZS11 566 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 MAVSQ7Z434 540 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 SLC9B2Q86UD5 537 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 TREML1Q86YW5 311 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 PHC3Q8NDX5 983 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 SKA2Q8WVK7 121 aaPredicted RBP16.38■□□□□ 0.21
EPHB4-204ENST00000477446 CXorf40BQ96DE9 158 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 PRR11Q96HE9 360 aaPredicted RBP16.38■□□□□ 0.21
EPHB4-204ENST00000477446 TRMOQ9BU70 441 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 GOLGA8QA0A0J9YX86 632 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 GOLGA8OA6NCC3 632 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 GOLGA8NF8WBI6 632 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 EIF3FO00303 357 aaPredicted RBP16.38■□□□□ 0.21
EPHB4-204ENST00000477446 PPM1DO15297 605 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 IPO13O94829 963 aaKnown RBP16.38■□□□□ 0.21
EPHB4-204ENST00000477446 TSPAN12O95859 305 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 CKMT1AP12532 417 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 ENO3P13929 434 aaPredicted RBP16.38■□□□□ 0.21
EPHB4-204ENST00000477446 FASLGP48023 281 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 RGS4P49798 205 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 RAP1GDS1P52306 607 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 DAB2P98082 770 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 HHEXQ03014 270 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.38■□□□□ 0.21
EPHB4-204ENST00000477446 ATG14Q6ZNE5 492 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 NEK10Q6ZWH5 1172 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 ACAD11Q709F0 780 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 TRIM48Q8IWZ4 208 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 ANKRD49Q8WVL7 239 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 LINGO1Q96FE5 620 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 MIPEPQ99797 713 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 POT1Q9NUX5 634 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 LRIT1Q9P2V4 623 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 ASF1AQ9Y294 204 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 HEBP2Q9Y5Z4 205 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 RNF215Q9Y6U7 377 aa16.38■□□□□ 0.21
EPHB4-204ENST00000477446 EME2A4GXA9 379 aaPredicted RBP16.37■□□□□ 0.21
EPHB4-204ENST00000477446 TRPC5OSA6NMA1 111 aa16.37■□□□□ 0.21
EPHB4-204ENST00000477446 SLC30A4O14863 429 aa16.37■□□□□ 0.21
EPHB4-204ENST00000477446 NUDT21O43809 227 aaKnown RBP16.37■□□□□ 0.21
EPHB4-204ENST00000477446 MATN4O95460 622 aa16.37■□□□□ 0.21
EPHB4-204ENST00000477446 VIPP01282 170 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms