RNA–Protein interactions for RNA: ENST00000477345.1

TPRN-203, Transcript of taperin, humanhuman

TSL 1 (best)

Gene TPRN, Length 3,350 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRN-203ENST00000477345 CSF2P04141 144 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 PFKLP17858 780 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 HERVK_113P63132 956 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 DDX39BQ13838 428 aaKnown RBP12.66□□□□□ -0.38
TPRN-203ENST00000477345 SKIV2LQ15477 1246 aaKnown RBP12.66□□□□□ -0.38
TPRN-203ENST00000477345 CYHR1Q6ZMK1 362 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 HIPK1Q86Z02 1210 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 DEDD2Q8WXF8 326 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 FYTTD1Q96QD9 318 aaKnown RBP12.66□□□□□ -0.38
TPRN-203ENST00000477345 NPY6RQ99463 290 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 KIFC1Q9BW19 673 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 ERVK-6Q9BXR3 956 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 AMBRA1Q9C0C7 1298 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 ZNF556Q9HAH1 456 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 RANGRFQ9HD47 186 aaPredicted RBP12.66□□□□□ -0.38
TPRN-203ENST00000477345 BRD7Q9NPI1 651 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 NMRK2Q9NPI5 230 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 POLR3BQ9NW08 1133 aaPredicted RBP12.66□□□□□ -0.38
TPRN-203ENST00000477345 OAS3Q9Y6K5 1087 aaKnown RBP12.66□□□□□ -0.38
TPRN-203ENST00000477345 RBBP6Q7Z6E9 1792 aaKnown RBP12.66□□□□□ -0.38
TPRN-203ENST00000477345 SLC22A2O15244 555 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 RNGTTO60942 597 aaKnown RBP12.66□□□□□ -0.38
TPRN-203ENST00000477345 CYP2A6P11509 494 aaPredicted RBP12.66□□□□□ -0.38
TPRN-203ENST00000477345 CD9P21926 228 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 PROZP22891 400 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 EPHA2P29317 976 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 MAGEA12P43365 314 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 LEXMQ3ZCV2 418 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 FAM209BQ5JX69 171 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 PRMT9Q6P2P2 845 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 BBS7Q8IWZ6 715 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 CHCHD4Q8N4Q1 142 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 Q96MT0 163 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 GPR21Q99679 349 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 TSEN34Q9BSV6 310 aaKnown RBP12.66□□□□□ -0.38
TPRN-203ENST00000477345 EIF3KQ9UBQ5 218 aaKnown RBP12.66□□□□□ -0.38
TPRN-203ENST00000477345 ENOPH1Q9UHY7 261 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 SNX6Q9UNH7 406 aa12.66□□□□□ -0.38
TPRN-203ENST00000477345 MN1Q10571 1320 aaPredicted RBP12.65□□□□□ -0.38
TPRN-203ENST00000477345 A0A1W2PP18 115 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 OR4Q2P0C623 313 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 HRH2P25021 359 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 HOXA11P31270 313 aaPredicted RBP12.65□□□□□ -0.38
TPRN-203ENST00000477345 HNF1BP35680 557 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 PTPN5P54829 565 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 GP2P55259 537 aaKnown RBP12.65□□□□□ -0.38
TPRN-203ENST00000477345 PTPRNQ16849 979 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 CYP27C1Q4G0S4 372 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 ZNF517Q6ZMY9 492 aaPredicted RBP12.65□□□□□ -0.38
TPRN-203ENST00000477345 EFL1Q7Z2Z2 1120 aaKnown RBP12.65□□□□□ -0.38
TPRN-203ENST00000477345 CARNMT1Q8N4J0 409 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 PPTC7Q8NI37 304 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 FAM120BQ96EK7 910 aaKnown RBP12.65□□□□□ -0.38
TPRN-203ENST00000477345 PCED1BQ96HM7 432 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 MS4A4AQ96JQ5 239 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 BARD1Q99728 777 aaKnown RBP12.65□□□□□ -0.38
TPRN-203ENST00000477345 NECTIN3Q9NQS3 549 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 PAK1IP1Q9NWT1 392 aaPredicted RBP12.65□□□□□ -0.38
TPRN-203ENST00000477345 CCDC59Q9P031 241 aaKnown RBP12.65□□□□□ -0.38
TPRN-203ENST00000477345 PRKAB1Q9Y478 270 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 OR6C70A6NIJ9 312 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 ZNF98A6NK75 572 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 PRMT5O14744 637 aaPredicted RBP12.65□□□□□ -0.38
TPRN-203ENST00000477345 NBNO60934 754 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 PAGE1O75459 146 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 SERPINA1P01009 418 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 S100A6P06703 90 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 IGFBP5P24593 272 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 CDKN1CP49918 316 aaPredicted RBP12.65□□□□□ -0.38
TPRN-203ENST00000477345 SEMG2Q02383 582 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 PAFAH1B3Q15102 231 aaKnown RBP12.65□□□□□ -0.38
TPRN-203ENST00000477345 OTUD1Q5VV17 481 aaPredicted RBP12.65□□□□□ -0.38
TPRN-203ENST00000477345 LCN8Q6JVE9 175 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 KRTCAP2Q8N6L1 136 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 LGALS12Q96DT0 336 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 TSSK3Q96PN8 268 aa12.65□□□□□ -0.38
TPRN-203ENST00000477345 SLC12A8A0AV02 714 aa12.64□□□□□ -0.39
TPRN-203ENST00000477345 F8W810 466 aa12.64□□□□□ -0.39
TPRN-203ENST00000477345 NIPSNAP2O75323 286 aa12.64□□□□□ -0.39
TPRN-203ENST00000477345 GABARAPO95166 117 aa12.64□□□□□ -0.39
TPRN-203ENST00000477345 POMCP01189 267 aa12.64□□□□□ -0.39
TPRN-203ENST00000477345 ZNF250P15622 560 aa12.64□□□□□ -0.39
TPRN-203ENST00000477345 MSH3P20585 1137 aa12.64□□□□□ -0.39
TPRN-203ENST00000477345 SNRPD2P62316 118 aaKnown RBP12.64□□□□□ -0.39
TPRN-203ENST00000477345 CD83Q01151 205 aa12.64□□□□□ -0.39
TPRN-203ENST00000477345 MFSD13AQ14CX5 517 aa12.64□□□□□ -0.39
TPRN-203ENST00000477345 MAPKAPK3Q16644 382 aa12.64□□□□□ -0.39
TPRN-203ENST00000477345 DPY19L1Q2PZI1 675 aa12.64□□□□□ -0.39
TPRN-203ENST00000477345 BLOC1S3Q6QNY0 202 aa12.64□□□□□ -0.39
TPRN-203ENST00000477345 ZNF704Q6ZNC4 412 aaPredicted RBP12.64□□□□□ -0.39
TPRN-203ENST00000477345 ULK4Q96C45 1275 aa12.64□□□□□ -0.39
TPRN-203ENST00000477345 RNF170Q96K19 258 aa12.64□□□□□ -0.39
TPRN-203ENST00000477345 ZBTB18Q99592 522 aa12.64□□□□□ -0.39
TPRN-203ENST00000477345 TRAF4Q9BUZ4 470 aaPredicted RBP12.64□□□□□ -0.39
TPRN-203ENST00000477345 NUAK2Q9H093 628 aa12.64□□□□□ -0.39
TPRN-203ENST00000477345 CARS2Q9HA77 564 aaKnown RBP12.64□□□□□ -0.39
TPRN-203ENST00000477345 TMEM30AQ9NV96 361 aa12.64□□□□□ -0.39
TPRN-203ENST00000477345 C3orf18Q9UK00 162 aa12.64□□□□□ -0.39
TPRN-203ENST00000477345 A0A096LPI6 279 aa12.64□□□□□ -0.39
TPRN-203ENST00000477345 MYADML2A6NDP7 307 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms