RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 MGAT1P26572 445 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 PSMB5P28074 263 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 CDC25BP30305 580 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 FOLR3P41439 243 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 BDKRB1P46663 353 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 OR1D4P47884 311 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 RRADP55042 308 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 SNRPNP63162 240 aaKnown RBP6.73□□□□□ -1.33
HDAC3-207ENST00000475549 PRAMEP78395 509 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 Q0VFX4 171 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 GBX1Q14549 363 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 MYBPC3Q14896 1274 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 RPS6KA1Q15418 735 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 SF1Q15637 639 aaKnown RBP6.73□□□□□ -1.33
HDAC3-207ENST00000475549 NKG7Q16617 165 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.73□□□□□ -1.33
HDAC3-207ENST00000475549 FHL5Q5TD97 284 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 VWA5B1Q5TIE3 1220 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 FRMPD2BQ6IN97 320 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 FIGLAQ6QHK4 219 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 KIRREL2Q6UWL6 708 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 UNC5DQ6UXZ4 953 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 SHISA6Q6ZSJ9 500 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 TTLL10Q6ZVT0 673 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 OVCH1Q7RTY7 1134 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 CUZD1Q86UP6 607 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 HOOK3Q86VS8 718 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 DCUN1D3Q8IWE4 304 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 SHISA5Q8N114 240 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 MPP5Q8N3R9 675 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 CISD2Q8N5K1 135 aaKnown RBP6.73□□□□□ -1.33
HDAC3-207ENST00000475549 CCDC89Q8N998 374 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 OR2A1Q8NGT9 310 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 HMGCLL1Q8TB92 370 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 LPGAT1Q92604 370 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 N4BP2L2Q92802 583 aaPredicted RBP6.73□□□□□ -1.33
HDAC3-207ENST00000475549 FAM136AQ96C01 138 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 SPSB2Q99619 263 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 KIFC1Q9BW19 673 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 EIF2B3Q9NR50 452 aaKnown RBP6.73□□□□□ -1.33
HDAC3-207ENST00000475549 CATSPERZQ9NTU4 200 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 SYBUQ9NX95 663 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 PAK5Q9P286 719 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 CTSFQ9UBX1 484 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 TTC7AQ9ULT0 858 aaPredicted RBP6.73□□□□□ -1.33
HDAC3-207ENST00000475549 NTNG1Q9Y2I2 539 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 MED16Q9Y2X0 877 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 KLK4Q9Y5K2 254 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 ZNF106Q9H2Y7 1883 aaKnown RBP6.73□□□□□ -1.33
HDAC3-207ENST00000475549 IGKV1-8A0A0C4DH67 115 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 A0A1B0GX78 115 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 TARM1B6A8C7 271 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 AGPSO00116 658 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 NIPSNAP2O75323 286 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 S1PR4O95977 384 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 GAS8O95995 478 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 FGGP02679 453 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 MMP11P24347 488 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 FMO4P31512 558 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 CXCR5P32302 372 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 NPY2RP49146 381 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 TTPAP49638 278 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 TERF1P54274 439 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 EIF3BP55884 814 aaKnown RBP6.72□□□□□ -1.33
HDAC3-207ENST00000475549 CYP2A13Q16696 494 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 C4orf17Q53FE4 359 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 WASHC2DQ5SRD0 308 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 SEL1L2Q5TEA6 688 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 ANKRD22Q5VYY1 191 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 PTRHD1Q6GMV3 140 aaKnown RBP6.72□□□□□ -1.33
HDAC3-207ENST00000475549 TTC27Q6P3X3 843 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 CNSTQ6PJW8 725 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 ZNF662Q6ZS27 426 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 CENPUQ71F23 418 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 OTOAQ7RTW8 1153 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 LAPTM4BQ86VI4 370 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 CAND1Q86VP6 1230 aaKnown RBP6.72□□□□□ -1.33
HDAC3-207ENST00000475549 RAB43Q86YS6 212 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 AGGF1Q8N302 714 aaeCLIP6.72□□□□□ -1.33
HDAC3-207ENST00000475549 ARHGEF39Q8N4T4 335 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 METTL27Q8N6F8 245 aaPredicted RBP6.72□□□□□ -1.33
HDAC3-207ENST00000475549 PRELID2Q8N945 189 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 CLEC1AQ8NC01 280 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 PPHLN1Q8NEY8 458 aaKnown RBP6.72□□□□□ -1.33
HDAC3-207ENST00000475549 OR2L3Q8NG85 312 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 PRR7Q8TB68 274 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 ZUFSPQ96AP4 578 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 RAD51AP1Q96B01 352 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 FER1L6-AS2Q96M78 137 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 IP6K3Q96PC2 410 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 TTC1Q99614 292 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 SLC30A3Q99726 388 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 C17orf62Q9BQA9 187 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 NDC1Q9BTX1 674 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 TSGA10Q9BZW7 698 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 IL22Q9GZX6 179 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 SLC26A1Q9H2B4 701 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 SOX17Q9H6I2 414 aaPredicted RBP6.72□□□□□ -1.33
HDAC3-207ENST00000475549 WDR54Q9H977 334 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 LRRC4CQ9HCJ2 640 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms