RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 LACC1Q8IV20 430 aa5.56□□□□□ -1.52
SMC5-203ENST00000475540 OR5AP2Q8NGF4 316 aa5.56□□□□□ -1.52
SMC5-203ENST00000475540 TAF15Q92804 592 aaKnown RBP eCLIP5.56□□□□□ -1.52
SMC5-203ENST00000475540 MOCOSQ96EN8 888 aa5.56□□□□□ -1.52
SMC5-203ENST00000475540 SERINC2Q96SA4 455 aa5.56□□□□□ -1.52
SMC5-203ENST00000475540 NUDT16L1Q9BRJ7 211 aaKnown RBP5.56□□□□□ -1.52
SMC5-203ENST00000475540 OR2B2Q9GZK3 357 aa5.56□□□□□ -1.52
SMC5-203ENST00000475540 OR6C2Q9NZP2 312 aa5.56□□□□□ -1.52
SMC5-203ENST00000475540 IL17BQ9UHF5 180 aa5.56□□□□□ -1.52
SMC5-203ENST00000475540 SLC24A2Q9UI40 661 aa5.56□□□□□ -1.52
SMC5-203ENST00000475540 PASKQ96RG2 1323 aa5.55□□□□□ -1.52
SMC5-203ENST00000475540 C2orf81A6NN90 581 aa5.55□□□□□ -1.52
SMC5-203ENST00000475540 SORBS2O94875 1100 aaKnown RBP5.55□□□□□ -1.52
SMC5-203ENST00000475540 IGHV2-70P01814 119 aa5.55□□□□□ -1.52
SMC5-203ENST00000475540 GSDMDP57764 484 aa5.55□□□□□ -1.52
SMC5-203ENST00000475540 MAT1AQ00266 395 aaKnown RBP5.55□□□□□ -1.52
SMC5-203ENST00000475540 ZNF415Q09FC8 603 aa5.55□□□□□ -1.52
SMC5-203ENST00000475540 TAF10Q12962 218 aa5.55□□□□□ -1.52
SMC5-203ENST00000475540 SQLEQ14534 574 aa5.55□□□□□ -1.52
SMC5-203ENST00000475540 CTU2Q2VPK5 515 aaKnown RBP5.55□□□□□ -1.52
SMC5-203ENST00000475540 FAM133BQ5BKY9 247 aaKnown RBP5.55□□□□□ -1.52
SMC5-203ENST00000475540 MFSD12Q6NUT3 480 aa5.55□□□□□ -1.52
SMC5-203ENST00000475540 C16orf54Q6UWD8 224 aa5.55□□□□□ -1.52
SMC5-203ENST00000475540 ARHGAP22Q7Z5H3 698 aa5.55□□□□□ -1.52
SMC5-203ENST00000475540 KRT77Q7Z794 578 aa5.55□□□□□ -1.52
SMC5-203ENST00000475540 TTC30BQ8N4P2 665 aa5.55□□□□□ -1.52
SMC5-203ENST00000475540 DCLK2Q8N568 766 aa5.55□□□□□ -1.52
SMC5-203ENST00000475540 OR13C3Q8NGS6 347 aa5.55□□□□□ -1.52
SMC5-203ENST00000475540 ZNF689Q96CS4 500 aaPredicted RBP5.55□□□□□ -1.52
SMC5-203ENST00000475540 THOC1Q96FV9 657 aaKnown RBP5.55□□□□□ -1.52
SMC5-203ENST00000475540 ZNF830Q96NB3 372 aaPredicted RBP5.55□□□□□ -1.52
SMC5-203ENST00000475540 DGAT2Q96PD7 388 aa5.55□□□□□ -1.52
SMC5-203ENST00000475540 PANK2Q9BZ23 570 aa5.55□□□□□ -1.52
SMC5-203ENST00000475540 FAM49AQ9H0Q0 323 aaPredicted RBP5.55□□□□□ -1.52
SMC5-203ENST00000475540 TRPV4Q9HBA0 871 aa5.55□□□□□ -1.52
SMC5-203ENST00000475540 EPHA6Q9UF33 1036 aa5.55□□□□□ -1.52
SMC5-203ENST00000475540 ABT1Q9ULW3 272 aaKnown RBP5.55□□□□□ -1.52
SMC5-203ENST00000475540 TNNQ9UQP3 1299 aa5.55□□□□□ -1.52
SMC5-203ENST00000475540 NEMP2A6NFY4 417 aa5.54□□□□□ -1.52
SMC5-203ENST00000475540 EPHB6O15197 1021 aa5.54□□□□□ -1.52
SMC5-203ENST00000475540 ADAM20O43506 726 aa5.54□□□□□ -1.52
SMC5-203ENST00000475540 ERAL1O75616 437 aaKnown RBP5.54□□□□□ -1.52
SMC5-203ENST00000475540 TRUB2O95900 331 aaKnown RBP5.54□□□□□ -1.52
SMC5-203ENST00000475540 CSTF2P33240 577 aaKnown RBP eCLIP5.54□□□□□ -1.52
SMC5-203ENST00000475540 CA9Q16790 459 aa5.54□□□□□ -1.52
SMC5-203ENST00000475540 XKR6Q5GH73 641 aa5.54□□□□□ -1.52
SMC5-203ENST00000475540 XKR3Q5GH77 459 aa5.54□□□□□ -1.52
SMC5-203ENST00000475540 CFAP58Q5T655 872 aa5.54□□□□□ -1.52
SMC5-203ENST00000475540 WLSQ5T9L3 541 aa5.54□□□□□ -1.52
SMC5-203ENST00000475540 C6orf163Q5TEZ5 329 aa5.54□□□□□ -1.52
SMC5-203ENST00000475540 LCN1P1Q5VSP4 162 aa5.54□□□□□ -1.52
SMC5-203ENST00000475540 METTL7BQ6UX53 244 aa5.54□□□□□ -1.52
SMC5-203ENST00000475540 PTAR1Q7Z6K3 402 aaPredicted RBP5.54□□□□□ -1.52
SMC5-203ENST00000475540 ZNF440Q8IYI8 595 aa5.54□□□□□ -1.52
SMC5-203ENST00000475540 OR8H2Q8N162 312 aa5.54□□□□□ -1.52
SMC5-203ENST00000475540 THAP8Q8NA92 274 aa5.54□□□□□ -1.52
SMC5-203ENST00000475540 AGAP3Q96P47 875 aa5.54□□□□□ -1.52
SMC5-203ENST00000475540 IWS1Q96ST2 819 aa5.54□□□□□ -1.52
SMC5-203ENST00000475540 FGFBP2Q9BYJ0 223 aa5.54□□□□□ -1.52
SMC5-203ENST00000475540 PIH1D3Q9NQM4 214 aaKnown RBP5.54□□□□□ -1.52
SMC5-203ENST00000475540 FAM207AQ9NSI2 230 aaPredicted RBP5.54□□□□□ -1.52
SMC5-203ENST00000475540 OLAHQ9NV23 265 aa5.54□□□□□ -1.52
SMC5-203ENST00000475540 MORF4L1Q9UBU8 362 aa5.54□□□□□ -1.52
SMC5-203ENST00000475540 STUB1Q9UNE7 303 aa5.54□□□□□ -1.52
SMC5-203ENST00000475540 IGKV3D-20A0A0C4DH25 116 aa5.53□□□□□ -1.52
SMC5-203ENST00000475540 TCRBV21S2A2A0A5A6 115 aa5.53□□□□□ -1.52
SMC5-203ENST00000475540 ERI2A8K979 691 aaKnown RBP5.53□□□□□ -1.52
SMC5-203ENST00000475540 GLRA3O75311 464 aa5.53□□□□□ -1.52
SMC5-203ENST00000475540 NXPH2O95156 264 aa5.53□□□□□ -1.52
SMC5-203ENST00000475540 NR2F1P10589 423 aa5.53□□□□□ -1.52
SMC5-203ENST00000475540 MAPK12P53778 367 aa5.53□□□□□ -1.52
SMC5-203ENST00000475540 KRTAP10-12P60413 245 aa5.53□□□□□ -1.52
SMC5-203ENST00000475540 HERC3Q15034 1050 aa5.53□□□□□ -1.52
SMC5-203ENST00000475540 UGP2Q16851 508 aa5.53□□□□□ -1.52
SMC5-203ENST00000475540 HLA-BQ31612 363 aa5.53□□□□□ -1.52
SMC5-203ENST00000475540 UGT3A2Q3SY77 523 aa5.53□□□□□ -1.52
SMC5-203ENST00000475540 SLC35D3Q5M8T2 416 aa5.53□□□□□ -1.52
SMC5-203ENST00000475540 BSPRYQ5W0U4 402 aa5.53□□□□□ -1.52
SMC5-203ENST00000475540 GPR139Q6DWJ6 353 aa5.53□□□□□ -1.52
SMC5-203ENST00000475540 OR10G8Q8NGN5 311 aa5.53□□□□□ -1.52
SMC5-203ENST00000475540 UBXN6Q9BZV1 441 aa5.53□□□□□ -1.52
SMC5-203ENST00000475540 NOL11Q9H8H0 719 aaKnown RBP5.53□□□□□ -1.52
SMC5-203ENST00000475540 PRMT7Q9NVM4 692 aaPredicted RBP5.53□□□□□ -1.52
SMC5-203ENST00000475540 ERAP1Q9NZ08 941 aa5.53□□□□□ -1.52
SMC5-203ENST00000475540 NOL7Q9UMY1 257 aaKnown RBP5.53□□□□□ -1.52
SMC5-203ENST00000475540 MMP24Q9Y5R2 645 aa5.53□□□□□ -1.52
SMC5-203ENST00000475540 KRTAP16-1A8MUX0 517 aa5.52□□□□□ -1.53
SMC5-203ENST00000475540 CDK2AP2O75956 126 aa5.52□□□□□ -1.53
SMC5-203ENST00000475540 RAB40ALP0C0E4 278 aa5.52□□□□□ -1.53
SMC5-203ENST00000475540 CCR10P46092 362 aa5.52□□□□□ -1.53
SMC5-203ENST00000475540 IFI35P80217 286 aaPredicted RBP5.52□□□□□ -1.53
SMC5-203ENST00000475540 SLC1A5Q15758 541 aa5.52□□□□□ -1.53
SMC5-203ENST00000475540 SLC25A53Q5H9E4 307 aa5.52□□□□□ -1.53
SMC5-203ENST00000475540 FIP1L1Q6UN15 594 aaKnown RBP5.52□□□□□ -1.53
SMC5-203ENST00000475540 G2E3Q7L622 706 aa5.52□□□□□ -1.53
SMC5-203ENST00000475540 CAMKMTQ7Z624 323 aa5.52□□□□□ -1.53
SMC5-203ENST00000475540 GTSCR1Q86UQ5 136 aa5.52□□□□□ -1.53
SMC5-203ENST00000475540 POMGNT2Q8NAT1 580 aa5.52□□□□□ -1.53
SMC5-203ENST00000475540 GPRC5AQ8NFJ5 357 aa5.52□□□□□ -1.53
SMC5-203ENST00000475540 TEKT4Q8WW24 435 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms