RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 OR4K3Q96R72 315 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 FERD3LQ96RJ6 166 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 ORAI3Q9BRQ5 295 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 SGPP1Q9BX95 441 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 RAB11FIP5Q9BXF6 653 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 LRMDAQ9H2I8 198 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 MVB12BQ9H7P6 319 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 AASDHPPTQ9NRN7 309 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 GPR27Q9NS67 375 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 IMP3Q9NV31 184 aaKnown RBP13.32□□□□□ -0.28
TRAF4-210ENST00000475329 INTS7Q9NVH2 962 aaKnown RBP13.32□□□□□ -0.28
TRAF4-210ENST00000475329 TRNAU1APQ9NX07 287 aaKnown RBP13.32□□□□□ -0.28
TRAF4-210ENST00000475329 SNX6Q9UNH7 406 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 DYRK1BQ9Y463 629 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 HEBP2Q9Y5Z4 205 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 COPG1Q9Y678 874 aaKnown RBP13.32□□□□□ -0.28
TRAF4-210ENST00000475329 CFAP20Q9Y6A4 193 aaKnown RBP13.32□□□□□ -0.28
TRAF4-210ENST00000475329 DGKBQ9Y6T7 804 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 THADAQ6YHU6 1953 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 KCNE1BA0A087WTH5 132 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 CFAP73A6NFT4 308 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 METTL12A8MUP2 240 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 MEI4A8MW99 385 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 E7EQ34 232 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 TNFRSF10AO00220 468 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 PI15O43692 258 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 TNFP01375 233 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 PRR35P0CG20 571 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 MTHFD1P11586 935 aaKnown RBP13.31□□□□□ -0.28
TRAF4-210ENST00000475329 JUPP14923 745 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 GNAZP19086 355 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 CTBSQ01459 385 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 RPL6Q02878 288 aaKnown RBP13.31□□□□□ -0.28
TRAF4-210ENST00000475329 PCDH1Q08174 1060 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 PRKG2Q13237 762 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 TSTA3Q13630 321 aaPredicted RBP13.31□□□□□ -0.28
TRAF4-210ENST00000475329 KRT33BQ14525 404 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 ABRAXAS2Q15018 415 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 HERC3Q15034 1050 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 CPSF6Q16630 551 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRAF4-210ENST00000475329 CYP2A13Q16696 494 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 ATP6AP1LQ52LC2 224 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 XKR6Q5GH73 641 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 PRAMEF14Q5SWL7 426 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 PRAMEF13Q5VWM6 474 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 OGFOD2Q6N063 350 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 WASH2PQ6VEQ5 465 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 LRRC56Q8IYG6 542 aaPredicted RBP13.31□□□□□ -0.28
TRAF4-210ENST00000475329 RGL4Q8IZJ4 473 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 OR2T11Q8NH01 316 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 KLHDC7BQ96G42 594 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 SLC6A18Q96N87 628 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 MIPEPQ99797 713 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 TMEM168Q9H0V1 697 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 WASH6PQ9NQA3 447 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 PRDM8Q9NQV8 689 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.31□□□□□ -0.287e-6■■■□□ 16.5
TRAF4-210ENST00000475329 ZNF490Q9ULM2 529 aaPredicted RBP13.31□□□□□ -0.28
TRAF4-210ENST00000475329 PLAGL1Q9UM63 463 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 INVSQ9Y283 1065 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 KCNE2Q9Y6J6 123 aa13.31□□□□□ -0.28
TRAF4-210ENST00000475329 TDRD6O60522 2096 aaKnown RBP13.31□□□□□ -0.28
TRAF4-210ENST00000475329 SPTY2D1-AS1A0A0U1RR47 76 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 E7ENX8 843 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 K7ESF4 209 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 RGS14O43566 566 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 KDM1AO60341 852 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 PRAMEF4O60810 478 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 PEX11AO75192 247 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 ULK1O75385 1050 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 ALDOCP09972 364 aaKnown RBP13.3□□□□□ -0.28
TRAF4-210ENST00000475329 COX4I1P13073 169 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 PTPN4P29074 926 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 HNF4AP41235 474 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 ACTR1BP42025 376 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 MNAT1P51948 309 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 ACTR1AP61163 376 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 TAP2Q03519 686 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 ILF3Q12906 894 aaKnown RBP eCLIP13.3□□□□□ -0.28
TRAF4-210ENST00000475329 CLCA4Q14CN2 919 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 NR6A1Q15406 480 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 ZRSR2Q15696 482 aaKnown RBP13.3□□□□□ -0.28
TRAF4-210ENST00000475329 RPE65Q16518 533 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 GSTA3Q16772 222 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 IMPG1Q17R60 797 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 USP39Q53GS9 565 aaKnown RBP13.3□□□□□ -0.28
TRAF4-210ENST00000475329 SGO1Q5FBB7 561 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 THEMIS2Q5TEJ8 643 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 PRAMEF9Q5VWM5 478 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 GRHL2Q6ISB3 625 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 LCTLQ6UWM7 567 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 ABRAXAS1Q6UWZ7 409 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 ASRGL1Q7L266 308 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 LPCAT2Q7L5N7 544 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 DCP2Q8IU60 420 aaKnown RBP13.3□□□□□ -0.28
TRAF4-210ENST00000475329 SETD7Q8WTS6 366 aaKnown RBP13.3□□□□□ -0.28
TRAF4-210ENST00000475329 USP7Q93009 1102 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 SLC7A6OSQ96CW6 309 aaPredicted RBP13.3□□□□□ -0.28
TRAF4-210ENST00000475329 PPP3R2Q96LZ3 170 aa13.3□□□□□ -0.28
TRAF4-210ENST00000475329 CAMK1GQ96NX5 476 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms