RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ACVRL1P37023 503 aa10.74□□□□□ -0.69
VAPB-204ENST00000475243 SCARB2Q14108 478 aa10.74□□□□□ -0.69
VAPB-204ENST00000475243 ELOA3BQ3SY89 546 aa10.74□□□□□ -0.69
VAPB-204ENST00000475243 FAM92BQ6ZTR7 304 aa10.74□□□□□ -0.69
VAPB-204ENST00000475243 ZNF627Q7L945 461 aa10.74□□□□□ -0.69
VAPB-204ENST00000475243 ELOA3Q8NG57 546 aa10.74□□□□□ -0.69
VAPB-204ENST00000475243 SLC13A3Q8WWT9 602 aa10.74□□□□□ -0.69
VAPB-204ENST00000475243 RNF39Q9H2S5 420 aa10.74□□□□□ -0.69
VAPB-204ENST00000475243 SEC61A2Q9H9S3 476 aa10.74□□□□□ -0.69
VAPB-204ENST00000475243 AJAP1Q9UKB5 411 aaPredicted RBP10.74□□□□□ -0.69
VAPB-204ENST00000475243 FKBP7Q9Y680 259 aa10.74□□□□□ -0.69
VAPB-204ENST00000475243 ATRNL1Q5VV63 1379 aa10.74□□□□□ -0.69
VAPB-204ENST00000475243 RGPD8O14715 1765 aaPredicted RBP10.73□□□□□ -0.69
VAPB-204ENST00000475243 DAPL1A0PJW8 107 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 NPHS1O60500 1241 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 AOC2O75106 756 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 TRAPPC6AO75865 159 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 LDOC1O95751 146 aaPredicted RBP10.73□□□□□ -0.69
VAPB-204ENST00000475243 CRB2Q5IJ48 1285 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 FOXR2Q6PJQ5 311 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 ABHD13Q7L211 337 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 P2RY8Q86VZ1 359 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 POF1BQ8WVV4 589 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 UFD1Q92890 307 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 FBXL12Q9NXK8 326 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 CAMTA1Q9Y6Y1 1673 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 CLDN7O95471 211 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 RENP00797 406 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 JUNP05412 331 aaKnown RBP10.73□□□□□ -0.69
VAPB-204ENST00000475243 XIAPP98170 497 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 PLGLB1Q02325 96 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 TMEM139Q8IV31 216 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 PIK3R3Q92569 461 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 COL21A1Q96P44 957 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 SLC39A3Q9BRY0 314 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 SP140LQ9H930 580 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 IL1RAPQ9NPH3 570 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 PRAMEF33A0A0G2JMD5 474 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 SRRM3A6NNA2 597 aaPredicted RBP10.73□□□□□ -0.69
VAPB-204ENST00000475243 ZNF726A6NNF4 738 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 PRAMEF10O60809 474 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 OPN1SWP03999 348 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 TSTD1Q8NFU3 115 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 TMEM203Q969S6 136 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 PIGVQ9NUD9 493 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 CCDC88AQ3V6T2 1871 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 SLC7A4O43246 635 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 MMP20O60882 483 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 RPP14O95059 124 aaKnown RBP10.73□□□□□ -0.69
VAPB-204ENST00000475243 PRH1P02810 166 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 UNGP13051 313 aaPredicted RBP10.73□□□□□ -0.69
VAPB-204ENST00000475243 GGT5P36269 586 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 KCNQ1P51787 676 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 IL4I1Q96RQ9 567 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 PKP4Q99569 1192 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 EURLQ9NYK6 297 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 PFDN2Q9UHV9 154 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 DPPA5A6NC42 116 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 REM1O75628 298 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 IL1R2P27930 398 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 HERVK_113P63132 956 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 METTL21CQ5VZV1 264 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 CMTM8Q8IZV2 173 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 OR4E2Q8NGC2 313 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 FAM129BQ96TA1 746 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 ERVK-6Q9BXR3 956 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 ZCCHC3Q9NUD5 404 aaKnown RBP10.73□□□□□ -0.69
VAPB-204ENST00000475243 MPZL2O60487 215 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 SCELO95171 688 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 NRG3P56975 720 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 CDKL1Q00532 357 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 CD47Q08722 323 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 BNIP1Q12981 228 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 ADGRE1Q14246 886 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 ODF4Q2M2E3 257 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 GRASPQ7Z6J2 395 aaPredicted RBP10.73□□□□□ -0.69
VAPB-204ENST00000475243 OR8H1Q8NGG4 311 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 ZDHHC4Q9NPG8 344 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 VPS29Q9UBQ0 182 aa10.73□□□□□ -0.69
VAPB-204ENST00000475243 TULP2O00295 520 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 PPEF2O14830 753 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 HCRTO43612 131 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 OR1I1O60431 355 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 DNAJA2O60884 412 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 B4GALT2O60909 372 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 PRAMEF12O95522 483 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 CH25HO95992 272 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 PSKH1P11801 424 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 ECHS1P30084 290 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 CDKN1CP49918 316 aaPredicted RBP10.72□□□□□ -0.69
VAPB-204ENST00000475243 FPGSQ05932 587 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 P4HA3Q7Z4N8 544 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 SUN3Q8TAQ9 357 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 ROPN1LQ96C74 230 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 CRELD1Q96HD1 420 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 C8orf48Q96LL4 319 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 C11orf84Q9BUA3 381 aaPredicted RBP10.72□□□□□ -0.69
VAPB-204ENST00000475243 ADAM7Q9H2U9 754 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 EBF3Q9H4W6 596 aa10.72□□□□□ -0.69
VAPB-204ENST00000475243 TMEM98Q9Y2Y6 226 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms