RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 ZFPM2Q8WW38 1151 aa6.42□□□□□ -1.38
ATG4A-207ENST00000474825 NELL1Q92832 810 aa6.42□□□□□ -1.38
ATG4A-207ENST00000474825 USP7Q93009 1102 aa6.42□□□□□ -1.38
ATG4A-207ENST00000474825 C19orf60Q96EN9 201 aa6.42□□□□□ -1.38
ATG4A-207ENST00000474825 THOC1Q96FV9 657 aaKnown RBP6.42□□□□□ -1.38
ATG4A-207ENST00000474825 PDXPQ96GD0 296 aa6.42□□□□□ -1.38
ATG4A-207ENST00000474825 OR4K3Q96R72 315 aa6.42□□□□□ -1.38
ATG4A-207ENST00000474825 EGFL8Q99944 293 aa6.42□□□□□ -1.38
ATG4A-207ENST00000474825 TUBB6Q9BUF5 446 aa6.42□□□□□ -1.38
ATG4A-207ENST00000474825 NUF2Q9BZD4 464 aa6.42□□□□□ -1.38
ATG4A-207ENST00000474825 NMUR2Q9GZQ4 415 aa6.42□□□□□ -1.38
ATG4A-207ENST00000474825 EHD1Q9H4M9 534 aa6.42□□□□□ -1.38
ATG4A-207ENST00000474825 WDR55Q9H6Y2 383 aaPredicted RBP6.42□□□□□ -1.38
ATG4A-207ENST00000474825 MVB12BQ9H7P6 319 aa6.42□□□□□ -1.38
ATG4A-207ENST00000474825 SEMA4BQ9NPR2 832 aaPredicted RBP6.42□□□□□ -1.38
ATG4A-207ENST00000474825 MRPL40Q9NQ50 206 aaKnown RBP6.42□□□□□ -1.38
ATG4A-207ENST00000474825 TCF7L2Q9NQB0 619 aa6.42□□□□□ -1.38
ATG4A-207ENST00000474825 DNAJC11Q9NVH1 559 aa6.42□□□□□ -1.38
ATG4A-207ENST00000474825 INTS7Q9NVH2 962 aaKnown RBP6.42□□□□□ -1.38
ATG4A-207ENST00000474825 TMEM45AQ9NWC5 275 aa6.42□□□□□ -1.38
ATG4A-207ENST00000474825 WWOXQ9NZC7 414 aa6.42□□□□□ -1.38
ATG4A-207ENST00000474825 POLG2Q9UHN1 485 aa6.42□□□□□ -1.38
ATG4A-207ENST00000474825 ZNHIT2Q9UHR6 403 aa6.42□□□□□ -1.38
ATG4A-207ENST00000474825 SLC12A4Q9UP95 1085 aa6.42□□□□□ -1.38
ATG4A-207ENST00000474825 WDR37Q9Y2I8 494 aa6.42□□□□□ -1.38
ATG4A-207ENST00000474825 TSC22D4Q9Y3Q8 395 aa6.42□□□□□ -1.38
ATG4A-207ENST00000474825 PLXND1Q9Y4D7 1925 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 ZNF839A8K0R7 811 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 IFRD1O00458 451 aaPredicted RBP6.41□□□□□ -1.38
ATG4A-207ENST00000474825 PI15O43692 258 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 PRICKLE3O43900 615 aaPredicted RBP6.41□□□□□ -1.38
ATG4A-207ENST00000474825 CCNT2O60583 730 aaKnown RBP6.41□□□□□ -1.38
ATG4A-207ENST00000474825 HNRNPCL1O60812 293 aaKnown RBP6.41□□□□□ -1.38
ATG4A-207ENST00000474825 DIAPH2O60879 1101 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 ATP5HO75947 161 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 UBOX5O94941 541 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 OR4F21O95013 312 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 FSBPO95073 299 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 UNC5CO95185 931 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 RASGRP1O95267 797 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 CLDN9O95484 217 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 TNFP01375 233 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 WNT1P04628 370 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 DCNP07585 359 aaKnown RBP6.41□□□□□ -1.38
ATG4A-207ENST00000474825 SLC35G4P0C7Q5 338 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 HGFP14210 728 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 PCSK2P16519 638 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 PRPH2P23942 346 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 CCND1P24385 295 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 NDUFS1P28331 727 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 EPHA3P29320 983 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 PRDX6P30041 224 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 BDKRB1P46663 353 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 GNPDA1P46926 289 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 PNLIPRP1P54315 467 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 RACK1P63244 317 aaKnown RBP6.41□□□□□ -1.38
ATG4A-207ENST00000474825 NHLH1Q02575 133 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 SF3A3Q12874 501 aaKnown RBP eCLIP6.41□□□□□ -1.38
ATG4A-207ENST00000474825 NAE1Q13564 534 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 CLCA4Q14CN2 919 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 RPE65Q16518 533 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 SPRED3Q2MJR0 410 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 USP39Q53GS9 565 aaKnown RBP6.41□□□□□ -1.38
ATG4A-207ENST00000474825 C10orf62Q5T681 223 aaPredicted RBP6.41□□□□□ -1.38
ATG4A-207ENST00000474825 CLEC6AQ6EIG7 209 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 LCTLQ6UWM7 567 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 SLCO4C1Q6ZQN7 724 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 Q6ZSR9 355 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 ACAD11Q709F0 780 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 ASRGL1Q7L266 308 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 LPCAT2Q7L5N7 544 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 CHST15Q7LFX5 561 aaPredicted RBP6.41□□□□□ -1.38
ATG4A-207ENST00000474825 MILR1Q7Z6M3 343 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 WDR5BQ86VZ2 330 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 THOC6Q86W42 341 aaKnown RBP6.41□□□□□ -1.38
ATG4A-207ENST00000474825 MAML2Q8IZL2 1156 aaPredicted RBP6.41□□□□□ -1.38
ATG4A-207ENST00000474825 OR5AR1Q8NGP9 310 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 RLN3Q8WXF3 142 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 ERP27Q96DN0 273 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 PTCD3Q96EY7 689 aaKnown RBP6.41□□□□□ -1.38
ATG4A-207ENST00000474825 METTL2AQ96IZ6 378 aaKnown RBP6.41□□□□□ -1.38
ATG4A-207ENST00000474825 SPACA7Q96KW9 195 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 C3orf30Q96M34 536 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 KCNA7Q96RP8 456 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 MIPEPQ99797 713 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 TPSD1Q9BZJ3 242 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 SHCBP1LQ9BZQ2 653 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 TRIT1Q9H3H1 467 aaKnown RBP6.41□□□□□ -1.38
ATG4A-207ENST00000474825 KIR3DX1Q9H7L2 352 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 CARS2Q9HA77 564 aaKnown RBP6.41□□□□□ -1.38
ATG4A-207ENST00000474825 PFDN4Q9NQP4 134 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 KLQ9UEF7 1012 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 TBC1D29Q9UFV1 150 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 LNPEPQ9UIQ6 1025 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 PPT2Q9UMR5 302 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 TRIM33Q9UPN9 1127 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 SLC22A14Q9Y267 594 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 ASF1AQ9Y294 204 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 CA5BQ9Y2D0 317 aa6.41□□□□□ -1.38
ATG4A-207ENST00000474825 PLEKHM1Q9Y4G2 1056 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms