RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 SLC22A14Q9Y267 594 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 SNX11Q9Y5W9 270 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 SLCO1B1Q9Y6L6 691 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 TDRD6O60522 2096 aaKnown RBP9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 TNRC6BQ9UPQ9 1833 aaKnown RBP9.96□□□□□ -0.81
PRPF38A-202ENST00000474048 LRRC14BA6NHZ5 514 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 RHPN2P1A8MT19 583 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 LMO7DNF2Z398 122 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 HDAC3O15379 428 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 TAPBPO15533 448 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 DIAPH2O60879 1101 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 SKAP2O75563 359 aaPredicted RBP9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 PIAS2O75928 621 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 CLDN9O95484 217 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 ESRRBO95718 433 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 KRT6AP02538 564 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 KRT6BP04259 564 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 EBLN1P0CF75 366 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 UROSP10746 265 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 PKLRP30613 574 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 GRK3P35626 688 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 GDF5P43026 501 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 CTSKP43235 329 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 SLC6A12P48065 614 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 KRT6CP48668 564 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 CCT8P50990 548 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 AQP5P55064 265 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 SF3A3Q12874 501 aaKnown RBP eCLIP9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 IFT88Q13099 833 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 PDCD2Q16342 344 aaPredicted RBP9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 IMPG1Q17R60 797 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 KIF19Q2TAC6 998 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 DEFB133Q30KQ1 61 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 C18orf21Q32NC0 220 aaPredicted RBP9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 TRIM61Q5EBN2 209 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 XKR6Q5GH73 641 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 NXNQ6DKJ4 435 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 IYDQ6PHW0 289 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 ADCK2Q7Z695 626 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 TMPRSS11BQ86T26 416 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 AMIGO1Q86WK6 493 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 PPFIBP2Q8ND30 876 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 OR2L8Q8NGY9 312 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 OR10G6Q8NH81 332 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 METTL6Q8TCB7 284 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 AGAP11Q8TF27 550 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 SETD7Q8WTS6 366 aaKnown RBP9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 ZNF480Q8WV37 535 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 UBE2E3Q969T4 207 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 NSUN5Q96P11 429 aaKnown RBP9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 SLC38A3Q99624 504 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 CCT7Q99832 543 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 DUSP23Q9BVJ7 150 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 GTPBP2Q9BX10 602 aaKnown RBP9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 IRF2BPLQ9H1B7 796 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 ELOVL6Q9H5J4 265 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 ACSS2Q9NR19 701 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 RIC8BQ9NVN3 520 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 OR6C2Q9NZP2 312 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 TRPS1Q9UHF7 1281 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 TRIM33Q9UPN9 1127 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 ARL2BPQ9Y2Y0 163 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 TRAF6Q9Y4K3 522 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 PCDHB11Q9Y5F2 797 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 PCDHGA5Q9Y5G8 931 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 CSNK1G3Q9Y6M4 447 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 USH1CQ9Y6N9 552 aa9.96□□□□□ -0.82
PRPF38A-202ENST00000474048 GOLGA8QA0A0J9YX86 632 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 GSAPA4D1B5 854 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 FAM221BA6H8Z2 402 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 GOLGA8OA6NCC3 632 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 ISM1B1AKI9 464 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 GOLGA8NF8WBI6 632 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 KHNYNO15037 678 aaKnown RBP9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 MAP3K7O43318 606 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 UGDHO60701 494 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 GPR37L1O60883 481 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 DCTN3O75935 186 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 OR4F21O95013 312 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 AMD1P17707 334 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 XRCC1P18887 633 aaPredicted RBP9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 CXCR2P25025 360 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 CMPK1P30085 196 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 MPLP40238 635 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 HNF4AP41235 474 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 GRIK2Q13002 908 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 CHIT1Q13231 466 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 LAPTM5Q13571 262 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 TERF2Q15554 542 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 TBCCQ15814 346 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 CCSMST1Q4G0I0 132 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 SUSD1Q6UWL2 747 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 LCTLQ6UWM7 567 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 RPS27LQ71UM5 84 aaKnown RBP9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 NRROSQ86YC3 692 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 KRT78Q8N1N4 520 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 CDYL2Q8N8U2 506 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 OR56A3Q8NH54 315 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 C1orf216Q8TAB5 229 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 SLC37A2Q8TED4 501 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms