RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 WASH2PQ6VEQ5 465 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 TIPARPQ7Z3E1 657 aaKnown RBP8.88□□□□□ -0.99
SMC4-213ENST00000472282 GALNT7Q86SF2 657 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 ZNF605Q86T29 641 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 SLC9B2Q86UD5 537 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 SLC26A11Q86WA9 606 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 RELL1Q8IUW5 271 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 CTAGE3PQ8IX95 158 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 FBF1Q8TES7 1133 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 CDKL2Q92772 493 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 CXorf40BQ96DE9 158 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 MED8Q96G25 268 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 C12orf66Q96MD2 445 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 NDNQ99608 321 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 AARSD1Q9BTE6 412 aaKnown RBP8.88□□□□□ -0.99
SMC4-213ENST00000472282 DDA1Q9BW61 102 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 SLC12A9Q9BXP2 914 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 B3GNT4Q9C0J1 378 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 OR52A5Q9H2C5 316 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 STN1Q9H668 368 aaKnown RBP8.88□□□□□ -0.99
SMC4-213ENST00000472282 WASH6PQ9NQA3 447 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 IMP3Q9NV31 184 aaKnown RBP8.88□□□□□ -0.99
SMC4-213ENST00000472282 NSMCE4AQ9NXX6 385 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 AKAP7Q9P0M2 348 aaPredicted RBP8.88□□□□□ -0.99
SMC4-213ENST00000472282 ACSL5Q9ULC5 683 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 HEATR5BQ9P2D3 2071 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 MN1Q10571 1320 aaPredicted RBP8.87□□□□□ -0.99
SMC4-213ENST00000472282 LILRA5A6NI73 299 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 B4E171 279 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 B8ZZF3 427 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 STMND1H3BQB6 276 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 ZW10O43264 779 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 RAD1O60671 282 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 VIPP01282 170 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 FAM87AP0C7U9 286 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 MTHFD1P11586 935 aaKnown RBP8.87□□□□□ -0.99
SMC4-213ENST00000472282 TYRP1P17643 537 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 XRCC1P18887 633 aaPredicted RBP8.87□□□□□ -0.99
SMC4-213ENST00000472282 CHRM3P20309 590 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 CD82P27701 267 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 AOAHP28039 575 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 PHBP35232 272 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 TSPAN7P41732 249 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 EPHA4P54764 986 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 PPP1CAP62136 330 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 VSNL1P62760 191 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 TUBB4BP68371 445 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 NFKB2Q00653 900 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 MC2RQ01718 297 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 HSPA14Q0VDF9 509 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 RPA4Q13156 261 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 SLMAPQ14BN4 828 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 RPE65Q16518 533 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 TBR1Q16650 682 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 ERCC6LQ2NKX8 1250 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 TMEM164Q5U3C3 297 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 CAPRIN2Q6IMN6 1127 aaKnown RBP8.87□□□□□ -0.99
SMC4-213ENST00000472282 TMEM26Q6ZUK4 368 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 OTOAQ7RTW8 1153 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 STRA8Q7Z7C7 330 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 VRK3Q8IV63 474 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 ZBTB2Q8N680 514 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 PPM1NQ8N819 430 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 GPATCH11Q8N954 259 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 AVL9Q8NBF6 648 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 SIDT2Q8NBJ9 832 aaKnown RBP8.87□□□□□ -0.99
SMC4-213ENST00000472282 ASZ1Q8WWH4 475 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 UBXN4Q92575 508 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 RSC1A1Q92681 617 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 GPR21Q99679 349 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 SLC30A3Q99726 388 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 DPYSL5Q9BPU6 564 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 RRAGDQ9NQL2 400 aaPredicted RBP8.87□□□□□ -0.99
SMC4-213ENST00000472282 POT1Q9NUX5 634 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 SIDT1Q9NXL6 827 aaKnown RBP8.87□□□□□ -0.99
SMC4-213ENST00000472282 GALPQ9UBC7 116 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 PILRAQ9UKJ1 303 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 CDYLQ9Y232 598 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 MED16Q9Y2X0 877 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 COMMD10Q9Y6G5 202 aa8.87□□□□□ -0.99
SMC4-213ENST00000472282 TNRC6AQ8NDV7 1962 aaKnown RBP8.86□□□□□ -0.99
SMC4-213ENST00000472282 MDC1Q14676 2089 aaKnown RBP8.86□□□□□ -0.99
SMC4-213ENST00000472282 LOC101059948A0A1B0GTJ6 334 aa8.86□□□□□ -0.99
SMC4-213ENST00000472282 FAM95CA0A1B0GW59 222 aa8.86□□□□□ -0.99
SMC4-213ENST00000472282 SERTM1A2A2V5 107 aa8.86□□□□□ -0.99
SMC4-213ENST00000472282 ADARB2-AS1A8MUL3 147 aa8.86□□□□□ -0.99
SMC4-213ENST00000472282 IFRD1O00458 451 aaPredicted RBP8.86□□□□□ -0.99
SMC4-213ENST00000472282 KPNA5O15131 536 aa8.86□□□□□ -0.99
SMC4-213ENST00000472282 KIF1CO43896 1103 aaKnown RBP8.86□□□□□ -0.99
SMC4-213ENST00000472282 VPS26AO75436 327 aa8.86□□□□□ -0.99
SMC4-213ENST00000472282 GPC4O75487 556 aa8.86□□□□□ -0.99
SMC4-213ENST00000472282 C9P02748 559 aa8.86□□□□□ -0.99
SMC4-213ENST00000472282 ZNF28P17035 718 aa8.86□□□□□ -0.99
SMC4-213ENST00000472282 SEPHS1P49903 392 aa8.86□□□□□ -0.99
SMC4-213ENST00000472282 CLCN7P51798 805 aa8.86□□□□□ -0.99
SMC4-213ENST00000472282 CDKN2DP55273 166 aa8.86□□□□□ -0.99
SMC4-213ENST00000472282 PLOD1Q02809 727 aaPredicted RBP8.86□□□□□ -0.99
SMC4-213ENST00000472282 NFATC3Q12968 1075 aa8.86□□□□□ -0.99
SMC4-213ENST00000472282 GPR18Q14330 331 aa8.86□□□□□ -0.99
SMC4-213ENST00000472282 GBX1Q14549 363 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms