RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 PNLIPRP2P54317 469 aa3.77□□□□□ -1.81
CD46-213ENST00000471987 AACSQ86V21 672 aa3.77□□□□□ -1.81
CD46-213ENST00000471987 C11orf53Q8IXP5 236 aa3.77□□□□□ -1.81
CD46-213ENST00000471987 DHX58Q96C10 678 aa3.77□□□□□ -1.81
CD46-213ENST00000471987 PUS3Q9BZE2 481 aaKnown RBP3.77□□□□□ -1.81
CD46-213ENST00000471987 THAP2Q9H0W7 228 aa3.77□□□□□ -1.81
CD46-213ENST00000471987 FAM207AQ9NSI2 230 aaPredicted RBP3.77□□□□□ -1.81
CD46-213ENST00000471987 ARHGEF38Q9NXL2 777 aa3.77□□□□□ -1.81
CD46-213ENST00000471987 STUB1Q9UNE7 303 aa3.77□□□□□ -1.81
CD46-213ENST00000471987 TRIM17Q9Y577 477 aa3.77□□□□□ -1.81
CD46-213ENST00000471987 PCDH11YQ9BZA8 1340 aa3.76□□□□□ -1.81
CD46-213ENST00000471987 PGPEP1LA6NFU8 196 aa3.76□□□□□ -1.81
CD46-213ENST00000471987 KLLNB2CW77 178 aa3.76□□□□□ -1.81
CD46-213ENST00000471987 USO1O60763 962 aaKnown RBP3.76□□□□□ -1.81
CD46-213ENST00000471987 MBD4O95243 580 aa3.76□□□□□ -1.81
CD46-213ENST00000471987 IGHEP01854 428 aa3.76□□□□□ -1.81
CD46-213ENST00000471987 GJA1P17302 382 aa3.76□□□□□ -1.81
CD46-213ENST00000471987 PTMSP20962 102 aa3.76□□□□□ -1.81
CD46-213ENST00000471987 MAPK4P31152 587 aa3.76□□□□□ -1.81
CD46-213ENST00000471987 TAF10Q12962 218 aa3.76□□□□□ -1.81
CD46-213ENST00000471987 IRF3Q14653 427 aa3.76□□□□□ -1.81
CD46-213ENST00000471987 EFTUD2Q15029 972 aaKnown RBP eCLIP3.76□□□□□ -1.814e-11■□□□□ 10.4
CD46-213ENST00000471987 HPS6Q86YV9 775 aa3.76□□□□□ -1.81
CD46-213ENST00000471987 FBXO39Q8N4B4 442 aa3.76□□□□□ -1.81
CD46-213ENST00000471987 TTC39CQ8N584 583 aa3.76□□□□□ -1.81
CD46-213ENST00000471987 AQP11Q8NBQ7 271 aa3.76□□□□□ -1.81
CD46-213ENST00000471987 GKN1Q9NS71 199 aa3.76□□□□□ -1.81
CD46-213ENST00000471987 NOTCH2Q04721 2471 aa3.76□□□□□ -1.81
CD46-213ENST00000471987 LOC105371242A0A075B767 164 aa3.75□□□□□ -1.81
CD46-213ENST00000471987 ACOD1A6NK06 481 aa3.75□□□□□ -1.81
CD46-213ENST00000471987 PAPSS1O43252 624 aaPredicted RBP3.75□□□□□ -1.81
CD46-213ENST00000471987 SLC15A1P46059 708 aa3.75□□□□□ -1.81
CD46-213ENST00000471987 CSNK2BP67870 215 aa3.75□□□□□ -1.81
CD46-213ENST00000471987 GCNT1Q02742 428 aa3.75□□□□□ -1.81
CD46-213ENST00000471987 SLC35D3Q5M8T2 416 aa3.75□□□□□ -1.81
CD46-213ENST00000471987 NOTUMQ6P988 496 aa3.75□□□□□ -1.81
CD46-213ENST00000471987 FRRS1Q6ZNA5 592 aa3.75□□□□□ -1.81
CD46-213ENST00000471987 CEP57Q86XR8 500 aa3.75□□□□□ -1.81
CD46-213ENST00000471987 MMP27Q9H306 513 aa3.75□□□□□ -1.81
CD46-213ENST00000471987 PSD3Q9NYI0 1048 aa3.75□□□□□ -1.81
CD46-213ENST00000471987 C19orf25Q9UFG5 118 aaPredicted RBP3.75□□□□□ -1.81
CD46-213ENST00000471987 B4DLN1 442 aa3.74□□□□□ -1.81
CD46-213ENST00000471987 PTGES3LE9PB15 166 aa3.74□□□□□ -1.81
CD46-213ENST00000471987 DDHD2O94830 711 aa3.74□□□□□ -1.81
CD46-213ENST00000471987 CENPBP07199 599 aaPredicted RBP3.74□□□□□ -1.81
CD46-213ENST00000471987 THEGLP0DJG4 465 aa3.74□□□□□ -1.81
CD46-213ENST00000471987 CSTF2P33240 577 aaKnown RBP eCLIP3.74□□□□□ -1.81
CD46-213ENST00000471987 PSMB10P40306 273 aa3.74□□□□□ -1.81
CD46-213ENST00000471987 HADHAP40939 763 aa3.74□□□□□ -1.81
CD46-213ENST00000471987 MRPL12P52815 198 aaKnown RBP3.74□□□□□ -1.81
CD46-213ENST00000471987 ARF3P61204 181 aaPredicted RBP3.74□□□□□ -1.81
CD46-213ENST00000471987 ARF1P84077 181 aaKnown RBP3.74□□□□□ -1.81
CD46-213ENST00000471987 ZNF415Q09FC8 603 aa3.74□□□□□ -1.81
CD46-213ENST00000471987 LMOD3Q0VAK6 560 aa3.74□□□□□ -1.81
CD46-213ENST00000471987 C15orf32Q32M92 178 aa3.74□□□□□ -1.81
CD46-213ENST00000471987 HSP90AB4PQ58FF6 505 aa3.74□□□□□ -1.81
CD46-213ENST00000471987 SLC47A2Q86VL8 602 aa3.74□□□□□ -1.81
CD46-213ENST00000471987 TMEM173Q86WV6 379 aaPredicted RBP3.74□□□□□ -1.81
CD46-213ENST00000471987 CATSPERDQ86XM0 798 aa3.74□□□□□ -1.81
CD46-213ENST00000471987 EXOC8Q8IYI6 725 aa3.74□□□□□ -1.81
CD46-213ENST00000471987 METTL4Q8N3J2 472 aa3.74□□□□□ -1.81
CD46-213ENST00000471987 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.74□□□□□ -1.81
CD46-213ENST00000471987 EXD1Q8NHP7 514 aa3.74□□□□□ -1.81
CD46-213ENST00000471987 APOBEC4Q8WW27 367 aaKnown RBP3.74□□□□□ -1.81
CD46-213ENST00000471987 OSGEPL1Q9H4B0 414 aa3.74□□□□□ -1.81
CD46-213ENST00000471987 TBC1D17Q9HA65 648 aa3.74□□□□□ -1.81
CD46-213ENST00000471987 GNB4Q9HAV0 340 aa3.74□□□□□ -1.81
CD46-213ENST00000471987 TRPV4Q9HBA0 871 aa3.74□□□□□ -1.81
CD46-213ENST00000471987 CLSPNQ9HAW4 1339 aa3.73□□□□□ -1.81
CD46-213ENST00000471987 PI4K2BG5E9Z4 385 aa3.73□□□□□ -1.81
CD46-213ENST00000471987 H0YAE9 185 aa3.73□□□□□ -1.81
CD46-213ENST00000471987 TRUB2O95900 331 aaKnown RBP3.73□□□□□ -1.81
CD46-213ENST00000471987 DARSP14868 501 aaKnown RBP3.73□□□□□ -1.81
CD46-213ENST00000471987 MTF1Q14872 753 aa3.73□□□□□ -1.81
CD46-213ENST00000471987 ZNF74Q16587 644 aa3.73□□□□□ -1.81
CD46-213ENST00000471987 RAB41Q5JT25 222 aa3.73□□□□□ -1.81
CD46-213ENST00000471987 CES4AQ5XG92 561 aa3.73□□□□□ -1.81
CD46-213ENST00000471987 KRT79Q5XKE5 535 aa3.73□□□□□ -1.81
CD46-213ENST00000471987 SEL1L3Q68CR1 1132 aa3.73□□□□□ -1.81
CD46-213ENST00000471987 FAAH2Q6GMR7 532 aa3.73□□□□□ -1.81
CD46-213ENST00000471987 UGT3A1Q6NUS8 523 aa3.73□□□□□ -1.81
CD46-213ENST00000471987 MARCH9Q86YJ5 346 aa3.73□□□□□ -1.81
CD46-213ENST00000471987 ATP8B4Q8TF62 1192 aa3.73□□□□□ -1.81
CD46-213ENST00000471987 SSMEM1Q8WWF3 244 aa3.73□□□□□ -1.81
CD46-213ENST00000471987 HDAC2Q92769 488 aaKnown RBP3.73□□□□□ -1.81
CD46-213ENST00000471987 SPAG5Q96R06 1193 aa3.73□□□□□ -1.81
CD46-213ENST00000471987 PANK2Q9BZ23 570 aa3.73□□□□□ -1.81
CD46-213ENST00000471987 B3GAT2Q9NPZ5 323 aa3.73□□□□□ -1.81
CD46-213ENST00000471987 SRRM5B3KS81 715 aa3.72□□□□□ -1.81
CD46-213ENST00000471987 TFECO14948 347 aaPredicted RBP3.72□□□□□ -1.81
CD46-213ENST00000471987 JAK1P23458 1154 aa3.72□□□□□ -1.81
CD46-213ENST00000471987 LBX1P52954 281 aa3.72□□□□□ -1.81
CD46-213ENST00000471987 CA9Q16790 459 aa3.72□□□□□ -1.81
CD46-213ENST00000471987 C11orf63Q6NUN7 778 aa3.72□□□□□ -1.81
CD46-213ENST00000471987 ABHD12Q8N2K0 398 aa3.72□□□□□ -1.81
CD46-213ENST00000471987 TOMM40LQ969M1 308 aa3.72□□□□□ -1.81
CD46-213ENST00000471987 PDLIM5Q96HC4 596 aaKnown RBP3.72□□□□□ -1.81
CD46-213ENST00000471987 MS4A10Q96PG2 267 aa3.72□□□□□ -1.81
CD46-213ENST00000471987 LGMNQ99538 433 aa3.72□□□□□ -1.81
CD46-213ENST00000471987 KIFC3Q9BVG8 833 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms