RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 GABRA4P48169 554 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 PRLHRP49683 370 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 TAS2R40P59535 323 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 SF1Q15637 639 aaKnown RBP6.56□□□□□ -1.36
HDAC1-204ENST00000471488 SLC1A5Q15758 541 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 FAM214AQ32MH5 1076 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 TEX44Q53QW1 395 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 ZC3H12BQ5HYM0 836 aaKnown RBP6.56□□□□□ -1.36
HDAC1-204ENST00000471488 TMEM198Q66K66 360 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 KAZNQ674X7 775 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 KDELC1Q6UW63 502 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 PID1Q7Z2X4 250 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 LAPTM4BQ86VI4 370 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 EID3Q8N140 333 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 CLDN19Q8N6F1 224 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 NIPA2Q8N8Q9 360 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 FAM98AQ8NCA5 519 aaKnown RBP6.56□□□□□ -1.36
HDAC1-204ENST00000471488 OR13C4Q8NGS5 318 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 ENOX1Q8TC92 643 aaKnown RBP6.56□□□□□ -1.36
HDAC1-204ENST00000471488 ELMO1Q92556 727 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 RAPGEF5Q92565 580 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 RNF25Q96BH1 459 aaPredicted RBP6.56□□□□□ -1.36
HDAC1-204ENST00000471488 ULK4Q96C45 1275 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 HAUS1Q96CS2 278 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 CABS1Q96KC9 395 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 RNF157Q96PX1 679 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 ERGIC2Q96RQ1 377 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 FICDQ9BVA6 458 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 POLDIP3Q9BY77 421 aaKnown RBP6.56□□□□□ -1.36
HDAC1-204ENST00000471488 ENKD1Q9H0I2 346 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 OR52A5Q9H2C5 316 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 LIME1Q9H400 295 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 INTS7Q9NVH2 962 aaKnown RBP6.56□□□□□ -1.36
HDAC1-204ENST00000471488 RIC8BQ9NVN3 520 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 IMPACTQ9P2X3 320 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 TRPC4Q9UBN4 977 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 RSPH14Q9UHP6 348 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 SEC16AO15027 2179 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 IGHV3-20A0A0C4DH32 117 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 A0A0J9YVX5 310 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 HYKKA2RU49 373 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 IDSB3KWA1 339 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 ASNA1O43681 348 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 SGTAO43765 313 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 SEC24DO94855 1032 aaPredicted RBP6.55□□□□□ -1.36
HDAC1-204ENST00000471488 KRT1P04264 644 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 ANXA5P08758 320 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 PRSS56P0CW18 603 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 FDXRP22570 491 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 KDELR1P24390 212 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 DNASE1P24855 282 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 PTPN3P26045 913 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 PEBP1P30086 187 aaKnown RBP6.55□□□□□ -1.36
HDAC1-204ENST00000471488 MC4RP32245 332 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 CD151P48509 253 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 CDKN1CP49918 316 aaPredicted RBP6.55□□□□□ -1.36
HDAC1-204ENST00000471488 MEOX1P50221 254 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 ARSEP51690 589 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 FOLH1Q04609 750 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 TSTA3Q13630 321 aaPredicted RBP6.55□□□□□ -1.36
HDAC1-204ENST00000471488 SNTB1Q13884 538 aaKnown RBP6.55□□□□□ -1.36
HDAC1-204ENST00000471488 FASTKQ14296 549 aaKnown RBP6.55□□□□□ -1.36
HDAC1-204ENST00000471488 MESDQ14696 234 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 KIR2DS3Q14952 304 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 OR1C1Q15619 314 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 MAPKAPK3Q16644 382 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 BTBD16Q32M84 506 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 KRTCAP3Q53RY4 240 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 TCTE1Q5JU00 501 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 WASHC2DQ5SRD0 308 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 E4F1Q66K89 784 aaPredicted RBP6.55□□□□□ -1.36
HDAC1-204ENST00000471488 SPINK14Q6IE38 97 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 FIGLAQ6QHK4 219 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 CLEC9AQ6UXN8 241 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.55□□□□□ -1.36
HDAC1-204ENST00000471488 CD163Q86VB7 1156 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 DOLPP1Q86YN1 238 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 CCDC71Q8IV32 467 aaPredicted RBP6.55□□□□□ -1.36
HDAC1-204ENST00000471488 ZZZ3Q8IYH5 903 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 BEST3Q8N1M1 668 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 GHDCQ8N2G8 530 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 PLD5Q8N7P1 536 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 ACRBPQ8NEB7 543 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 OR10Q1Q8NGQ4 319 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 NUDT8Q8WV74 236 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 SKA2Q8WVK7 121 aaPredicted RBP6.55□□□□□ -1.36
HDAC1-204ENST00000471488 PSMF1Q92530 271 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 MMABQ96EY8 250 aaPredicted RBP6.55□□□□□ -1.36
HDAC1-204ENST00000471488 RMND5BQ96G75 393 aaPredicted RBP6.55□□□□□ -1.36
HDAC1-204ENST00000471488 MRGPRX2Q96LB1 330 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 LINC00615Q96LM1 132 aaPredicted RBP6.55□□□□□ -1.36
HDAC1-204ENST00000471488 IL17FQ96PD4 163 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 SIGLEC12Q96PQ1 595 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 MDFIQ99750 246 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 FOXC2Q99958 501 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 SYT11Q9BT88 431 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 KCNJ16Q9NPI9 418 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 SMOXQ9NWM0 555 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 SMARCAL1Q9NZC9 954 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 OR6C2Q9NZP2 312 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms