RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 CES5AQ6NT32 575 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 RETSATQ6NUM9 610 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 MBOAT1Q6ZNC8 495 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 ADGRG2Q8IZP9 1017 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 APCDD1Q8J025 514 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 L3MBTL4Q8NA19 623 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 NODALQ96S42 347 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 INPP5KQ9BT40 448 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 PARVBQ9HBI1 364 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 VNN3Q9NY84 501 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 FBXO10Q9UK96 956 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 TDRKHQ9Y2W6 561 aaKnown RBP13.31□□□□□ -0.28
BRCA1-209ENST00000470026 TMED5Q9Y3A6 229 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 HSPE1-MOB4S4R3N1 261 aa13.31□□□□□ -0.28
BRCA1-209ENST00000470026 IGLV3-16A0A075B6K0 115 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.3□□□□□ -0.28
BRCA1-209ENST00000470026 UGT2B11O75310 529 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 ZNF821O75541 412 aaPredicted RBP13.3□□□□□ -0.28
BRCA1-209ENST00000470026 CCNDBP1O95273 360 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 UGT2B4P06133 528 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 JUNDP17535 347 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 SLC6A12P48065 614 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 CD97P48960 835 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 RPIAP49247 311 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 CXCR4P61073 352 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 ZXDBP98169 803 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 VAC14Q08AM6 782 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 CDH18Q13634 790 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 SPCS2Q15005 226 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 TPGS2Q68CL5 300 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 CAPN13Q6MZZ7 669 aaPredicted RBP13.3□□□□□ -0.28
BRCA1-209ENST00000470026 GPR155Q7Z3F1 870 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 SERPINA11Q86U17 422 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 ZSWIM9Q86XI8 627 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 CENPSQ8N2Z9 138 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 TCAIMQ8N3R3 496 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 PIK3C3Q8NEB9 887 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 ABHD11Q8NFV4 315 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 OR6K2Q8NGY2 324 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 CLHC1Q8NHS4 586 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 SNRNP27Q8WVK2 155 aaKnown RBP13.3□□□□□ -0.28
BRCA1-209ENST00000470026 NCLNQ969V3 563 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 C2orf49Q9BVC5 232 aaPredicted RBP13.3□□□□□ -0.28
BRCA1-209ENST00000470026 SLC12A9Q9BXP2 914 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 STARD7Q9NQZ5 370 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 ZDHHC3Q9NYG2 299 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 BAG5Q9UL15 447 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 ERGIC3Q9Y282 383 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 PPIL1Q9Y3C6 166 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 BCKDKO14874 412 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 ZSCAN9O15535 394 aaPredicted RBP13.3□□□□□ -0.28
BRCA1-209ENST00000470026 GABARAPO95166 117 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 SDC1P18827 310 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 CDKN2CP42773 168 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 PIGFQ07326 219 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 KEAP1Q14145 624 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 ARHGEF7Q14155 803 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 CPSF6Q16630 551 aaKnown RBP eCLIP13.3□□□□□ -0.28
BRCA1-209ENST00000470026 GALNT18Q6P9A2 607 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 CRTC3Q6UUV7 619 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 CYP4Z1Q86W10 505 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 PARP8Q8N3A8 854 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 GPR26Q8NDV2 337 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 FAR1Q8WVX9 515 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 SELENOMQ8WWX9 145 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 ZNF347Q96SE7 839 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 DUSP21Q9H596 190 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 IL1RAPQ9NPH3 570 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 SNX6Q9UNH7 406 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 SAMD4AQ9UPU9 718 aaKnown RBP13.3□□□□□ -0.28
BRCA1-209ENST00000470026 SNX5Q9Y5X3 404 aa13.3□□□□□ -0.28
BRCA1-209ENST00000470026 TET1Q8NFU7 2136 aa13.29□□□□□ -0.28
BRCA1-209ENST00000470026 COL4A6Q14031 1691 aa13.29□□□□□ -0.28
BRCA1-209ENST00000470026 ZNF99A8MXY4 864 aaPredicted RBP13.29□□□□□ -0.28
BRCA1-209ENST00000470026 E9PQ18 207 aa13.29□□□□□ -0.28
BRCA1-209ENST00000470026 E2F6O75461 281 aa13.29□□□□□ -0.28
BRCA1-209ENST00000470026 INMTO95050 263 aa13.29□□□□□ -0.28
BRCA1-209ENST00000470026 TACR1P25103 407 aa13.29□□□□□ -0.28
BRCA1-209ENST00000470026 MAPK1P28482 360 aa13.29□□□□□ -0.28
BRCA1-209ENST00000470026 CD6P30203 668 aa13.29□□□□□ -0.28
BRCA1-209ENST00000470026 CCR7P32248 378 aa13.29□□□□□ -0.28
BRCA1-209ENST00000470026 B4GALNT1Q00973 533 aa13.29□□□□□ -0.28
BRCA1-209ENST00000470026 PPP1R8Q12972 351 aaKnown RBP13.29□□□□□ -0.28
BRCA1-209ENST00000470026 RAPSNQ13702 412 aa13.29□□□□□ -0.28
BRCA1-209ENST00000470026 CARD16Q5EG05 197 aa13.29□□□□□ -0.28
BRCA1-209ENST00000470026 KDM4DQ6B0I6 523 aa13.29□□□□□ -0.28
BRCA1-209ENST00000470026 C16orf87Q6PH81 154 aa13.29□□□□□ -0.28
BRCA1-209ENST00000470026 ZDHHC21Q8IVQ6 265 aa13.29□□□□□ -0.28
BRCA1-209ENST00000470026 CPA6Q8N4T0 437 aa13.29□□□□□ -0.28
BRCA1-209ENST00000470026 SETD9Q8NE22 299 aa13.29□□□□□ -0.28
BRCA1-209ENST00000470026 VMP1Q96GC9 406 aa13.29□□□□□ -0.28
BRCA1-209ENST00000470026 CCDC138Q96M89 665 aa13.29□□□□□ -0.28
BRCA1-209ENST00000470026 SLC22A12Q96S37 553 aa13.29□□□□□ -0.28
BRCA1-209ENST00000470026 ATP13A3Q9H7F0 1226 aa13.29□□□□□ -0.28
BRCA1-209ENST00000470026 TM9SF3Q9HD45 589 aa13.29□□□□□ -0.28
BRCA1-209ENST00000470026 OBSL1O75147 1896 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 CXorf51AA0A1B0GTR3 108 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 NPIPB15A6NHN6 443 aaPredicted RBP13.28□□□□□ -0.28
BRCA1-209ENST00000470026 J3QRK9 145 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 NUAK1O60285 661 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms