RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 GPAMQ9HCL2 828 aa18.13■□□□□ 0.49
NCKIPSD-209ENST00000470006 ZNF304Q9HCX3 659 aa18.13■□□□□ 0.49
NCKIPSD-209ENST00000470006 INTS7Q9NVH2 962 aaKnown RBP18.13■□□□□ 0.49
NCKIPSD-209ENST00000470006 DDX56Q9NY93 547 aaKnown RBP18.13■□□□□ 0.49
NCKIPSD-209ENST00000470006 SMARCAL1Q9NZC9 954 aa18.13■□□□□ 0.49
NCKIPSD-209ENST00000470006 TRHDEQ9UKU6 1024 aa18.13■□□□□ 0.49
NCKIPSD-209ENST00000470006 FAM227AF5H4B4 570 aa18.12■□□□□ 0.49
NCKIPSD-209ENST00000470006 AP2A1O95782 977 aa18.12■□□□□ 0.49
NCKIPSD-209ENST00000470006 WDPCPO95876 746 aa18.12■□□□□ 0.49
NCKIPSD-209ENST00000470006 GSTM1P09488 218 aa18.12■□□□□ 0.49
NCKIPSD-209ENST00000470006 ZGLP1P0C6A0 271 aa18.12■□□□□ 0.49
NCKIPSD-209ENST00000470006 TPBGLP0DKB5 382 aa18.12■□□□□ 0.49
NCKIPSD-209ENST00000470006 FDXRP22570 491 aa18.12■□□□□ 0.49
NCKIPSD-209ENST00000470006 SOX11P35716 441 aa18.12■□□□□ 0.49
NCKIPSD-209ENST00000470006 GCGRP47871 477 aa18.12■□□□□ 0.49
NCKIPSD-209ENST00000470006 ZBED6P86452 979 aa18.12■□□□□ 0.49
NCKIPSD-209ENST00000470006 PMP22Q01453 160 aa18.12■□□□□ 0.49
NCKIPSD-209ENST00000470006 GSTM4Q03013 218 aa18.12■□□□□ 0.49
NCKIPSD-209ENST00000470006 EEF1A2Q05639 463 aaKnown RBP18.12■□□□□ 0.49
NCKIPSD-209ENST00000470006 OLIG2Q13516 323 aa18.12■□□□□ 0.49
NCKIPSD-209ENST00000470006 NAPRTQ6XQN6 538 aa18.12■□□□□ 0.49
NCKIPSD-209ENST00000470006 DTWD1Q8N5C7 304 aa18.12■□□□□ 0.49
NCKIPSD-209ENST00000470006 PSMF1Q92530 271 aa18.12■□□□□ 0.49
NCKIPSD-209ENST00000470006 ANP32EQ9BTT0 268 aa18.12■□□□□ 0.49
NCKIPSD-209ENST00000470006 ZNF282Q9UDV7 671 aaPredicted RBP18.12■□□□□ 0.49
NCKIPSD-209ENST00000470006 NCOA6Q14686 2063 aaPredicted RBP18.11■□□□□ 0.49
NCKIPSD-209ENST00000470006 BMP10O95393 424 aa18.11■□□□□ 0.49
NCKIPSD-209ENST00000470006 SERPINA7P05543 415 aa18.11■□□□□ 0.49
NCKIPSD-209ENST00000470006 PRSS56P0CW18 603 aa18.11■□□□□ 0.49
NCKIPSD-209ENST00000470006 ACADLP28330 430 aa18.11■□□□□ 0.49
NCKIPSD-209ENST00000470006 VSX2P58304 361 aaPredicted RBP18.11■□□□□ 0.49
NCKIPSD-209ENST00000470006 TYRO3Q06418 890 aa18.11■□□□□ 0.49
NCKIPSD-209ENST00000470006 NR1I3Q14994 352 aa18.11■□□□□ 0.49
NCKIPSD-209ENST00000470006 CDSNQ15517 529 aa18.11■□□□□ 0.49
NCKIPSD-209ENST00000470006 SF1Q15637 639 aaKnown RBP18.11■□□□□ 0.49
NCKIPSD-209ENST00000470006 HIBCHQ6NVY1 386 aaPredicted RBP18.11■□□□□ 0.49
NCKIPSD-209ENST00000470006 MEX3BQ6ZN04 569 aaKnown RBP18.11■□□□□ 0.49
NCKIPSD-209ENST00000470006 SLC35G2Q8TBE7 412 aa18.11■□□□□ 0.49
NCKIPSD-209ENST00000470006 SPOCK3Q9BQ16 436 aa18.11■□□□□ 0.49
NCKIPSD-209ENST00000470006 CIDEBQ9UHD4 219 aa18.11■□□□□ 0.49
NCKIPSD-209ENST00000470006 IGLV3-16A0A075B6K0 115 aa18.1■□□□□ 0.49
NCKIPSD-209ENST00000470006 HYKKA2RU49 373 aa18.1■□□□□ 0.49
NCKIPSD-209ENST00000470006 FANCGO15287 622 aa18.1■□□□□ 0.49
NCKIPSD-209ENST00000470006 PRAMEF2O60811 474 aa18.1■□□□□ 0.49
NCKIPSD-209ENST00000470006 CELA2AP08217 269 aa18.1■□□□□ 0.49
NCKIPSD-209ENST00000470006 COX6A1P12074 109 aa18.1■□□□□ 0.49
NCKIPSD-209ENST00000470006 ZNF140P52738 457 aaPredicted RBP18.1■□□□□ 0.49
NCKIPSD-209ENST00000470006 ART1P52961 327 aa18.1■□□□□ 0.49
NCKIPSD-209ENST00000470006 CSE1LP55060 971 aaKnown RBP18.1■□□□□ 0.49
NCKIPSD-209ENST00000470006 PRPSAP1Q14558 356 aa18.1■□□□□ 0.49
NCKIPSD-209ENST00000470006 ABHD17BQ5VST6 288 aa18.1■□□□□ 0.49
NCKIPSD-209ENST00000470006 ATG9BQ674R7 924 aa18.1■□□□□ 0.49
NCKIPSD-209ENST00000470006 FIGLAQ6QHK4 219 aa18.1■□□□□ 0.49
NCKIPSD-209ENST00000470006 MICALCLQ6ZW33 695 aa18.1■□□□□ 0.49
NCKIPSD-209ENST00000470006 TMTC1Q8IUR5 882 aa18.1■□□□□ 0.49
NCKIPSD-209ENST00000470006 ADAMTS18Q8TE60 1221 aa18.1■□□□□ 0.49
NCKIPSD-209ENST00000470006 SLC22A18Q96BI1 424 aa18.1■□□□□ 0.49
NCKIPSD-209ENST00000470006 GBA3Q9H227 469 aa18.1■□□□□ 0.49
NCKIPSD-209ENST00000470006 LUC7L2Q9Y383 392 aaKnown RBP18.1■□□□□ 0.49
NCKIPSD-209ENST00000470006 AP2A2O94973 939 aa18.09■□□□□ 0.49
NCKIPSD-209ENST00000470006 FTH1P02794 183 aa18.09■□□□□ 0.49
NCKIPSD-209ENST00000470006 EIF2S1P05198 315 aaKnown RBP18.09■□□□□ 0.49
NCKIPSD-209ENST00000470006 CDKN2BP42772 138 aa18.09■□□□□ 0.49
NCKIPSD-209ENST00000470006 EMP2P54851 167 aa18.09■□□□□ 0.49
NCKIPSD-209ENST00000470006 CSNK1G2P78368 415 aa18.09■□□□□ 0.49
NCKIPSD-209ENST00000470006 LONRF1Q17RB8 773 aa18.09■□□□□ 0.49
NCKIPSD-209ENST00000470006 WASHC2DQ5SRD0 308 aa18.09■□□□□ 0.49
NCKIPSD-209ENST00000470006 LRRC38Q5VT99 294 aa18.09■□□□□ 0.49
NCKIPSD-209ENST00000470006 ITPRIPL1Q6GPH6 555 aa18.09■□□□□ 0.49
NCKIPSD-209ENST00000470006 RANBP10Q6VN20 620 aa18.09■□□□□ 0.49
NCKIPSD-209ENST00000470006 LMNTD1Q8N9Z9 388 aa18.09■□□□□ 0.49
NCKIPSD-209ENST00000470006 DNAJC1Q96KC8 554 aaKnown RBP18.09■□□□□ 0.49
NCKIPSD-209ENST00000470006 QKIQ96PU8 341 aaKnown RBP eCLIP18.09■□□□□ 0.49
NCKIPSD-209ENST00000470006 LUC7LQ9NQ29 371 aaKnown RBP18.09■□□□□ 0.49
NCKIPSD-209ENST00000470006 STMN3Q9NZ72 180 aa18.09■□□□□ 0.49
NCKIPSD-209ENST00000470006 ZC3H7BQ9UGR2 993 aaKnown RBP18.09■□□□□ 0.49
NCKIPSD-209ENST00000470006 HYOU1Q9Y4L1 999 aa18.09■□□□□ 0.49
NCKIPSD-209ENST00000470006 SPG11Q96JI7 2443 aa18.08■□□□□ 0.49
NCKIPSD-209ENST00000470006 OR5H15A6NDH6 313 aa18.08■□□□□ 0.48
NCKIPSD-209ENST00000470006 H7C0C1 242 aa18.08■□□□□ 0.48
NCKIPSD-209ENST00000470006 MLYCDO95822 493 aa18.08■□□□□ 0.48
NCKIPSD-209ENST00000470006 FBLP22087 321 aaKnown RBP18.08■□□□□ 0.48
NCKIPSD-209ENST00000470006 PKLRP30613 574 aa18.08■□□□□ 0.48
NCKIPSD-209ENST00000470006 ATP5OP48047 213 aa18.08■□□□□ 0.48
NCKIPSD-209ENST00000470006 ZNF33BQ06732 778 aa18.08■□□□□ 0.48
NCKIPSD-209ENST00000470006 LAPTM4BQ86VI4 370 aa18.08■□□□□ 0.48
NCKIPSD-209ENST00000470006 CCDC50Q8IVM0 306 aa18.08■□□□□ 0.48
NCKIPSD-209ENST00000470006 CFAP61Q8NHU2 1237 aa18.08■□□□□ 0.48
NCKIPSD-209ENST00000470006 FERMT1Q9BQL6 677 aa18.08■□□□□ 0.48
NCKIPSD-209ENST00000470006 C10orf88Q9H8K7 445 aa18.08■□□□□ 0.48
NCKIPSD-209ENST00000470006 RIC8BQ9NVN3 520 aa18.08■□□□□ 0.48
NCKIPSD-209ENST00000470006 STOX2Q9P2F5 926 aaPredicted RBP18.08■□□□□ 0.48
NCKIPSD-209ENST00000470006 IMPACTQ9P2X3 320 aa18.08■□□□□ 0.48
NCKIPSD-209ENST00000470006 CAPN11Q9UMQ6 739 aa18.08■□□□□ 0.48
NCKIPSD-209ENST00000470006 NENFQ9UMX5 172 aa18.08■□□□□ 0.48
NCKIPSD-209ENST00000470006 AAR2Q9Y312 384 aaKnown RBP18.08■□□□□ 0.48
NCKIPSD-209ENST00000470006 MEMO1Q9Y316 297 aa18.08■□□□□ 0.48
NCKIPSD-209ENST00000470006 PRSS21Q9Y6M0 314 aa18.08■□□□□ 0.48
NCKIPSD-209ENST00000470006 FAM169AQ9Y6X4 670 aa18.08■□□□□ 0.48
NCKIPSD-209ENST00000470006 ANKHD1Q8IWZ3 2542 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms