RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 M0R3H8 397 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 PSMD9O00233 223 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 MID1O15344 667 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 SNAP91O60641 907 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 PMPCBO75439 489 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 MTA2O94776 668 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 TMCC1O94876 653 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 CER1O95813 267 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 CSTBP04080 98 aaKnown RBP6.22□□□□□ -1.41
PTCD3-208ENST00000469585 SRCP12931 536 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 ERCC2P18074 760 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 ITPKBP27987 946 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 AKT2P31751 481 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 NR2C2P49116 596 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 SUOXP51687 545 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 TPTEP56180 551 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 RWDD2BP57060 319 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 AP1S1P61966 158 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 ZNF33AQ06730 810 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 BCL2L1Q07817 233 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 IL10RBQ08334 325 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 ENPP2Q13822 863 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 BLMHQ13867 455 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 ACOX1Q15067 660 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 PLK5Q496M5 336 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 TFDP3Q5H9I0 405 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 C9orf64Q5T6V5 341 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 MARC1Q5VT66 337 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 OTUD1Q5VV17 481 aaPredicted RBP6.22□□□□□ -1.41
PTCD3-208ENST00000469585 PMS2CLQ68D20 193 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 TRNP1Q6NT89 227 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 C11orf63Q6NUN7 778 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 ANKRD16Q6P6B7 361 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 LINGO4Q6UY18 593 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 PARS2Q7L3T8 475 aaKnown RBP6.22□□□□□ -1.41
PTCD3-208ENST00000469585 BNIPLQ7Z465 357 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 PYROXD2Q8N2H3 581 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 RNF10Q8N5U6 811 aaKnown RBP6.22□□□□□ -1.41
PTCD3-208ENST00000469585 OR2AP1Q8NGE2 309 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 OR2T34Q8NGX1 318 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 CXorf40AQ8TE69 158 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 STYXQ8WUJ0 223 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 RLN3Q8WXF3 142 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 P3H4Q92791 437 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 HMCESQ96FZ2 354 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 CELF6Q96J87 481 aaKnown RBP6.22□□□□□ -1.41
PTCD3-208ENST00000469585 PPP1R2P1Q96PQ5 205 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 CSPG4P5Q96PW8 444 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 DPCDQ9BVM2 203 aaPredicted RBP6.22□□□□□ -1.41
PTCD3-208ENST00000469585 TM6SF2Q9BZW4 377 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 ARRDC1-AS1Q9H2J1 176 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 PREBQ9HCU5 417 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 CWC15Q9P013 229 aaKnown RBP6.22□□□□□ -1.41
PTCD3-208ENST00000469585 NKX1-2Q9UD57 310 aaPredicted RBP6.22□□□□□ -1.41
PTCD3-208ENST00000469585 IPO11Q9UI26 975 aaKnown RBP6.22□□□□□ -1.41
PTCD3-208ENST00000469585 CLEC4EQ9ULY5 219 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 IGHV1OR15-9A0A0B4J2B8 117 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 SHISA7A6NL88 538 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 A8MVJ9 347 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 BTNL10A8MVZ5 291 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 FAM72CH0Y354 149 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 H0YIZ8 118 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 SYT5O00445 386 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 PCDH17O14917 1159 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 BCAT2O15382 392 aaPredicted RBP6.21□□□□□ -1.42
PTCD3-208ENST00000469585 YKT6O15498 198 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 SPRY2O43597 315 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 DFNA5O60443 496 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 PRAMEF11O60813 436 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 EPN2O95208 641 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 LCA5LO95447 670 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 FSHBP01225 129 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 VIPP01282 170 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 ITGA5P08648 1049 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 NPPBP16860 134 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 TGM2P21980 687 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 KDELR1P24390 212 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 MMP13P45452 471 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 NUMBP49757 651 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 PAPOLAP51003 745 aaKnown RBP6.21□□□□□ -1.42
PTCD3-208ENST00000469585 CCNHP51946 323 aaPredicted RBP6.21□□□□□ -1.42
PTCD3-208ENST00000469585 HADHBP55084 474 aaKnown RBP6.21□□□□□ -1.42
PTCD3-208ENST00000469585 RPS14P62263 151 aaKnown RBP6.21□□□□□ -1.42
PTCD3-208ENST00000469585 RPS21P63220 83 aaKnown RBP6.21□□□□□ -1.42
PTCD3-208ENST00000469585 E2F1Q01094 437 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 OGDHQ02218 1023 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 DPTQ07507 201 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 AP1B1Q10567 949 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 ASTE1Q2TB18 679 aaPredicted RBP6.21□□□□□ -1.42
PTCD3-208ENST00000469585 MYLK3Q32MK0 819 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 CCDC38Q502W7 563 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 ANKRD20A8PQ5CZ79 823 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 ZNF805Q5CZA5 627 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 FAM72AQ5TYM5 149 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 TMEM215Q68D42 235 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 FAM72DQ6L9T8 149 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 KIAA1161Q6NSJ0 714 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 NEK5Q6P3R8 708 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 BRAT1Q6PJG6 821 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 GDPD4Q6W3E5 623 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms