RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 EPCAMP16422 314 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 RPL22P35268 128 aaKnown RBP9.73□□□□□ -0.85
NUP50-214ENST00000469163 PIK3CBP42338 1070 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 AP1S2P56377 157 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 ZNF273Q14593 569 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 GPNMBQ14956 572 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 SWI5Q1ZZU3 235 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 LINC00523Q86TU6 105 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 SPATA6LQ8N4H0 392 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 BANPQ8N9N5 519 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 FBXO36Q8NEA4 188 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 OR4M1Q8NGD0 313 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 NDNFQ8TB73 568 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 PHOSPHO2Q8TCD6 241 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 PAFAH2Q99487 392 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 MTIF3Q9H2K0 278 aaKnown RBP9.73□□□□□ -0.85
NUP50-214ENST00000469163 DSN1Q9H410 356 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 ADA2Q9NZK5 511 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 ASH2LQ9UBL3 628 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 SORCS3Q9UPU3 1222 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 SOCS2O14508 198 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 TRIM24O15164 1050 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 FAM155BO75949 473 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 SLC2A3P11169 496 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 ME2P23368 584 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 CST5P28325 142 aaPredicted RBP9.72□□□□□ -0.85
NUP50-214ENST00000469163 CHRNA4P43681 627 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 FLI1Q01543 452 aaPredicted RBP9.72□□□□□ -0.85
NUP50-214ENST00000469163 SHHQ15465 462 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 LRFN4Q6PJG9 635 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 ANGPTL8Q6UXH0 198 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 CYP2R1Q6VVX0 501 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 LDB1Q86U70 411 aaPredicted RBP9.72□□□□□ -0.85
NUP50-214ENST00000469163 TDRPQ86YL5 185 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 UBQLNLQ8IYU4 475 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 TNS4Q8IZW8 715 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 CBR4Q8N4T8 237 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 ZNF680Q8NEM1 530 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 SVIPQ8NHG7 77 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 UFD1Q92890 307 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 PTERQ96BW5 349 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 PPCSQ9HAB8 311 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 CFAP97Q9P2B7 532 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 AGO1Q9UL18 857 aaKnown RBP9.72□□□□□ -0.85
NUP50-214ENST00000469163 STX16-NPEPL1H3BU86 382 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 H7C4K7 107 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 GRM6O15303 877 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 LIASO43766 372 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 ABCB7O75027 752 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 TIPRLO75663 272 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 ABHD2P08910 425 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 OGNP20774 298 aaKnown RBP9.72□□□□□ -0.85
NUP50-214ENST00000469163 ERP29P30040 261 aaKnown RBP9.72□□□□□ -0.85
NUP50-214ENST00000469163 CORO1AP31146 461 aaKnown RBP9.72□□□□□ -0.85
NUP50-214ENST00000469163 RPL10AP62906 217 aaKnown RBP9.72□□□□□ -0.85
NUP50-214ENST00000469163 MERTKQ12866 999 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 MORF4L2Q15014 288 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 ZNF181Q2M3W8 571 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 NHSL2Q5HYW2 709 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 CCNYL2Q5T2Q4 361 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 DBX2Q6ZNG2 339 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 RAB43Q86YS6 212 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 PLD3Q8IV08 490 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 SLC22A15Q8IZD6 547 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 SVOPQ8N4V2 548 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 KREMEN2Q8NCW0 462 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 OR52K1Q8NGK4 314 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 MCFD2Q8NI22 146 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 SMIM14Q96QK8 99 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 SOX17Q9H6I2 414 aaPredicted RBP9.72□□□□□ -0.85
NUP50-214ENST00000469163 BPIFA1Q9NP55 256 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 SLAMF7Q9NQ25 335 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 MLXQ9UH92 298 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 PCDHB8Q9UN66 801 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 MRPS23Q9Y3D9 190 aaKnown RBP9.72□□□□□ -0.85
NUP50-214ENST00000469163 F5H5T6 163 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 H3BQ06 376 aaPredicted RBP9.72□□□□□ -0.85
NUP50-214ENST00000469163 INPPL1O15357 1258 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 GLUD1P00367 558 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 STARP49675 285 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 SLAMF1Q13291 335 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 GPR158Q5T848 1215 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 VWA5B1Q5TIE3 1220 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 RIF1Q5UIP0 2472 aaKnown RBP9.72□□□□□ -0.85
NUP50-214ENST00000469163 PDZD4Q76G19 769 aaPredicted RBP9.72□□□□□ -0.85
NUP50-214ENST00000469163 TIGD4Q8IY51 512 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 SFRP1Q8N474 314 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 OR8K5Q8NH50 307 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 PTP4A1Q93096 173 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 TCEAL4Q96EI5 215 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 QKIQ96PU8 341 aaKnown RBP eCLIP9.72□□□□□ -0.85
NUP50-214ENST00000469163 TNKS2Q9H2K2 1166 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 MARCH5Q9NX47 278 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 DUS2Q9NX74 493 aaKnown RBP9.72□□□□□ -0.85
NUP50-214ENST00000469163 PPP1R14DQ9NXH3 145 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 COPZ2Q9P299 210 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 PLXNA1Q9UIW2 1896 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 PLLPQ9Y342 182 aa9.72□□□□□ -0.85
NUP50-214ENST00000469163 A0A0D9SEW6 157 aa9.71□□□□□ -0.85
NUP50-214ENST00000469163 NEDD8-MDP1E9PL57 170 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms