RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 RARRES3Q9UL19 164 aa8.27□□□□□ -1.09
SSBP1-208ENST00000469123 NFS1Q9Y697 457 aa8.27□□□□□ -1.09
SSBP1-208ENST00000469123 SPEGQ15772 3267 aa8.27□□□□□ -1.09
SSBP1-208ENST00000469123 A0A087X1B8 175 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 IGHV5-51A0A0C4DH38 117 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 A0A1W2PNU3 283 aaPredicted RBP8.26□□□□□ -1.09
SSBP1-208ENST00000469123 A8MU76 341 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 CXorf49A8MYA2 514 aaPredicted RBP8.26□□□□□ -1.09
SSBP1-208ENST00000469123 CASC3O15234 703 aaKnown RBP8.26□□□□□ -1.09
SSBP1-208ENST00000469123 KRT38O76015 456 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 SLC16A8O95907 504 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 HBQ1P09105 142 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 LIPCP11150 499 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 FGF5P12034 268 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 CMPK1P30085 196 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 SLC5A2P31639 672 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 RPA3P35244 121 aaPredicted RBP8.26□□□□□ -1.09
SSBP1-208ENST00000469123 MSH2P43246 934 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 SEPHS1P49903 392 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 SERPINB8P50452 374 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 ATP1A2P50993 1020 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 MAPK10P53779 464 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 PNLIPRP1P54315 467 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 RELAQ04206 551 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 FOXM1Q08050 763 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 TUBB3Q13509 450 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 GRB7Q14451 532 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 ZC3H12BQ5HYM0 836 aaKnown RBP8.26□□□□□ -1.09
SSBP1-208ENST00000469123 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.26□□□□□ -1.09
SSBP1-208ENST00000469123 BROXQ5VW32 411 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 WDR93Q6P2C0 686 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 FBXO38Q6PIJ6 1188 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 FOXR1Q6PIV2 292 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 FRA10AC1Q70Z53 315 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 PIWIL4Q7Z3Z4 852 aaKnown RBP8.26□□□□□ -1.09
SSBP1-208ENST00000469123 TBC1D1Q86TI0 1168 aaPredicted RBP8.26□□□□□ -1.09
SSBP1-208ENST00000469123 MARCH9Q86YJ5 346 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 SYTL1Q8IYJ3 562 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 LINC01555Q8NAE3 123 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 MDM1Q8TC05 714 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 JPH3Q8WXH2 748 aaPredicted RBP8.26□□□□□ -1.09
SSBP1-208ENST00000469123 N4BP2L2Q92802 583 aaPredicted RBP8.26□□□□□ -1.09
SSBP1-208ENST00000469123 USP7Q93009 1102 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 MTBPQ96DY7 904 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 CABS1Q96KC9 395 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 TRAPPC9Q96Q05 1148 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 PKP4Q99569 1192 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 MIPEPQ99797 713 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 HAUS8Q9BT25 410 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 CCDC177Q9NQR7 707 aaPredicted RBP8.26□□□□□ -1.09
SSBP1-208ENST00000469123 SERTAD3Q9UJW9 196 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 TLK1Q9UKI8 766 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 MTO1Q9Y2Z2 717 aaKnown RBP8.26□□□□□ -1.09
SSBP1-208ENST00000469123 SDK2Q58EX2 2172 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 CACNA1BQ00975 2339 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 PTPRQQ9UMZ3 2332 aa8.26□□□□□ -1.09
SSBP1-208ENST00000469123 EPG5Q9HCE0 2579 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 ADAMTS20P59510 1910 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 A0A087WV48 116 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 EXOC1LA0A1B0GW35 172 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 SLC9B1P1A6NJY1 282 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 SYCE1LA8MT33 242 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 C9orf172C9J069 976 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 E7ENX8 843 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 RIPK2O43353 540 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 KIF1CO43896 1103 aaKnown RBP8.25□□□□□ -1.09
SSBP1-208ENST00000469123 PRICKLE3O43900 615 aaPredicted RBP8.25□□□□□ -1.09
SSBP1-208ENST00000469123 PRAMEF10O60809 474 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 KRT37O76014 449 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 IPO13O94829 963 aaKnown RBP8.25□□□□□ -1.09
SSBP1-208ENST00000469123 WISP3O95389 354 aaPredicted RBP8.25□□□□□ -1.09
SSBP1-208ENST00000469123 SYF2O95926 243 aaKnown RBP8.25□□□□□ -1.09
SSBP1-208ENST00000469123 F7P08709 466 aaPredicted RBP8.25□□□□□ -1.09
SSBP1-208ENST00000469123 ANXA5P08758 320 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 LTA4HP09960 611 aaKnown RBP8.25□□□□□ -1.09
SSBP1-208ENST00000469123 TPBGLP0DKB5 382 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 COL6A2P12110 1019 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 CCL4P13236 92 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 HGFP14210 728 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 ST6GAL1P15907 406 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 ITIH1P19827 911 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 SAT1P21673 171 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 IMPA1P29218 277 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 EIF2S3P41091 472 aaKnown RBP8.25□□□□□ -1.09
SSBP1-208ENST00000469123 ABCG1P45844 678 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 PPP1CAP62136 330 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 TAP2Q03519 686 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 PRDX1Q06830 199 aaKnown RBP8.25□□□□□ -1.09
SSBP1-208ENST00000469123 SF1Q15637 639 aaKnown RBP8.25□□□□□ -1.09
SSBP1-208ENST00000469123 FAM83EQ2M2I3 478 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 TCTE1Q5JU00 501 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 YOD1Q5VVQ6 348 aaPredicted RBP8.25□□□□□ -1.09
SSBP1-208ENST00000469123 CAPN13Q6MZZ7 669 aaPredicted RBP8.25□□□□□ -1.09
SSBP1-208ENST00000469123 KLC3Q6P597 504 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 TLDC1Q6P9B6 456 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 EMBQ6PCB8 327 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 RAPH1Q70E73 1250 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 LCA5Q86VQ0 697 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 GPR135Q8IZ08 494 aa8.25□□□□□ -1.09
SSBP1-208ENST00000469123 ESX1Q8N693 406 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms