RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 IL17CQ9P0M4 197 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 MARCH4Q9P2E8 410 aaPredicted RBP4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 TXNDC16Q9P2K2 825 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 DKK3Q9UBP4 350 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 CTNNAL1Q9UBT7 734 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 SERGEFQ9UGK8 458 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 CRLS1Q9UJA2 301 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 ZNF180Q9UJW8 692 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 G3BP2Q9UN86 482 aaKnown RBP4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 ANKRD6Q9Y2G4 727 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 CRYL1Q9Y2S2 319 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 MTO1Q9Y2Z2 717 aaKnown RBP4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 PPIL1Q9Y3C6 166 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 FADS3Q9Y5Q0 445 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 CHD5Q8TDI0 1954 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 A0A1W2PPM1 405 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 TSPAN11A1L157 253 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 TMEM221A6NGB7 291 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 LRRC72A6NJI9 287 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 FAM159BA6NKW6 160 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 TRIM49D1C9J1S8 452 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 GOLGA8RI6L899 631 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 K7ESM1 405 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 M0R296 226 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 AGPSO00116 658 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 MAP2K7O14733 419 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 SLC7A4O43246 635 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 ATP8B1O43520 1251 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 DCXO43602 365 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 FOXS1O43638 330 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 TSPAN6O43657 245 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 SPAG7O75391 227 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 MTX2O75431 263 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 TM7SF2O76062 418 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 SRP72O76094 671 aaKnown RBP4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 RECQL5O94762 991 aaPredicted RBP4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 PAPSS2O95340 614 aaPredicted RBP4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 AHSGP02765 367 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 MT-ND3P03897 115 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 IVLP07476 585 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 ABHD2P08910 425 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 NUDT17P0C025 328 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 MYZAPP0CAP1 466 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 PF4V1P10720 104 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 C6P13671 934 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 ZNF30P17039 623 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 ITGB6P18564 788 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 ITGALP20701 1170 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 GCAP28676 217 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 ADSLP30566 484 aaPredicted RBP4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 ACSL1P33121 698 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 CA5AP35218 305 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 SPRP35270 261 aaPredicted RBP4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 DRD3P35462 400 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 HMGCLP35914 325 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 MMP12P39900 470 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 HADHAP40939 763 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 CASRP41180 1078 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 SLC1A2P43004 574 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 CXCL12P48061 93 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 ARCN1P48444 511 aaKnown RBP4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 SPINT3P49223 89 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 GZMKP49863 264 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 TPMTP51580 245 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 ZNF140P52738 457 aaPredicted RBP4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 STC1P52823 247 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 PGGT1BP53609 377 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 EIF3BP55884 814 aaKnown RBP4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 TAS2R38P59533 333 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 XIAPP98170 497 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 CSTF1Q05048 431 aaKnown RBP4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 CACNG1Q06432 222 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 ZNF844Q08AG5 666 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 DMWDQ09019 674 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 RALGDSQ12967 914 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 GPS2Q13227 327 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 PEX6Q13608 980 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 SEMA3AQ14563 771 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 ZNF284Q2VY69 593 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 ATP13A5Q4VNC0 1218 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 SETMARQ53H47 684 aaPredicted RBP4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 HSP90B2PQ58FF3 399 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 ZNF789Q5FWF6 425 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 SPDYCQ5MJ68 293 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 GRTP1Q5TC63 336 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 LGSNQ5TDP6 509 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 SEL1L3Q68CR1 1132 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 ZNF470Q6ECI4 717 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 RAET1GQ6H3X3 334 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 KIAA0930Q6ICG6 404 aaPredicted RBP4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 MRNIPQ6NTE8 343 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 CNSTQ6PJW8 725 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 DOK6Q6PKX4 331 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 FAM111BQ6SJ93 734 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 AFTPHQ6ULP2 937 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 PACS1Q6VY07 963 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 DET1Q7L5Y6 550 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 SNX20Q7Z614 316 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 SLC26A11Q86WA9 606 aa4.02□□□□□ -1.77
TMEM39A-204ENST00000468545 SERPINA9Q86WD7 417 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms