RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 SFRP1Q8N474 314 aa6.67□□□□□ -1.34
SCAF4-204ENST00000467731 TEX9Q8N6V9 391 aa6.67□□□□□ -1.34
SCAF4-204ENST00000467731 MCOLN3Q8TDD5 553 aa6.67□□□□□ -1.34
SCAF4-204ENST00000467731 SLC37A2Q8TED4 501 aa6.67□□□□□ -1.34
SCAF4-204ENST00000467731 SAP25Q8TEE9 199 aa6.67□□□□□ -1.34
SCAF4-204ENST00000467731 HIST1H2AHQ96KK5 128 aa6.67□□□□□ -1.34
SCAF4-204ENST00000467731 FERD3LQ96RJ6 166 aa6.67□□□□□ -1.34
SCAF4-204ENST00000467731 NRTNQ99748 197 aa6.67□□□□□ -1.34
SCAF4-204ENST00000467731 HIST1H2AJQ99878 128 aa6.67□□□□□ -1.34
SCAF4-204ENST00000467731 EGFL8Q99944 293 aa6.67□□□□□ -1.34
SCAF4-204ENST00000467731 SPOCK3Q9BQ16 436 aa6.67□□□□□ -1.34
SCAF4-204ENST00000467731 H2AFJQ9BTM1 129 aa6.67□□□□□ -1.34
SCAF4-204ENST00000467731 HGH1Q9BTY7 390 aa6.67□□□□□ -1.34
SCAF4-204ENST00000467731 RDH14Q9HBH5 336 aa6.67□□□□□ -1.34
SCAF4-204ENST00000467731 ARL15Q9NXU5 204 aa6.67□□□□□ -1.34
SCAF4-204ENST00000467731 CD274Q9NZQ7 290 aa6.67□□□□□ -1.34
SCAF4-204ENST00000467731 SIRPGQ9P1W8 387 aa6.67□□□□□ -1.34
SCAF4-204ENST00000467731 TDRKHQ9Y2W6 561 aaKnown RBP6.67□□□□□ -1.34
SCAF4-204ENST00000467731 FAM186AA6NE01 2351 aa6.67□□□□□ -1.34
SCAF4-204ENST00000467731 WDR91A4D1P6 747 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 A8MT66 165 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 DFNA5O60443 496 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 DLX3O60479 287 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 SLC16A8O95907 504 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 RPN2P04844 631 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 ANXA6P08133 673 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 GIMD1P0DJR0 217 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 MYL2P10916 166 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 CPA3P15088 417 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 NBL1P41271 181 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 SERPINB4P48594 390 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 ATXN3P54252 364 aaPredicted RBP6.66□□□□□ -1.34
SCAF4-204ENST00000467731 KRT33BQ14525 404 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 C10orf107Q8IVU9 208 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 MINDY1Q8N5J2 469 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 ARFGAP2Q8N6H7 521 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 CXorf40BQ96DE9 158 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 TRIM54Q9BYV2 358 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 TRIT1Q9H3H1 467 aaKnown RBP6.66□□□□□ -1.34
SCAF4-204ENST00000467731 RABEP2Q9H5N1 569 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 CNOT10Q9H9A5 744 aaKnown RBP6.66□□□□□ -1.34
SCAF4-204ENST00000467731 INTS9Q9NV88 658 aaKnown RBP6.66□□□□□ -1.34
SCAF4-204ENST00000467731 PLAGL1Q9UM63 463 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 SH3GLB1Q9Y371 365 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 TIMM22Q9Y584 194 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 CSNK1G3Q9Y6M4 447 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 KIR2DS5A0A0G2JLQ3 304 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 A0A0G2JNG1 304 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 PABPN1LA6NDY0 278 aaKnown RBP6.66□□□□□ -1.34
SCAF4-204ENST00000467731 OR5K4A6NMS3 321 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 KIR2DS3K7RE56 304 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 PFDN1O60925 122 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 IPO13O94829 963 aaKnown RBP6.66□□□□□ -1.34
SCAF4-204ENST00000467731 LMNAP02545 664 aaKnown RBP6.66□□□□□ -1.34
SCAF4-204ENST00000467731 ZNF806P0C7X5 589 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 TPBGLP0DKB5 382 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 XRCC1P18887 633 aaPredicted RBP6.66□□□□□ -1.34
SCAF4-204ENST00000467731 TAC1P20366 129 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 AP1S2P56377 157 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 SPEM2Q0P670 501 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 MAP7Q14244 749 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 GRB7Q14451 532 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 KIR2DS5Q14953 304 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 SF3A2Q15428 464 aaKnown RBP6.66□□□□□ -1.34
SCAF4-204ENST00000467731 ZXDCQ2QGD7 858 aaPredicted RBP6.66□□□□□ -1.34
SCAF4-204ENST00000467731 C18orf21Q32NC0 220 aaPredicted RBP6.66□□□□□ -1.34
SCAF4-204ENST00000467731 ZYG11AQ6WRX3 759 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 KANSL1Q7Z3B3 1105 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 TRIM48Q8IWZ4 208 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 FBXO39Q8N4B4 442 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 PDPRQ8NCN5 879 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 FBXO15Q8NCQ5 510 aaPredicted RBP6.66□□□□□ -1.34
SCAF4-204ENST00000467731 RDH11Q8TC12 318 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 PMM1Q92871 262 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 ESAMQ96AP7 390 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 RAD51AP1Q96B01 352 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 RHBDF1Q96CC6 855 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 MOCOSQ96EN8 888 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 VMP1Q96GC9 406 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 PKP4Q99569 1192 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 MVB12BQ9H7P6 319 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 OXSMQ9NWU1 459 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 NUDT4Q9NZJ9 180 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 NCKIPSDQ9NZQ3 722 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 CPNE7Q9UBL6 633 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 MID2Q9UJV3 735 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 HEBP2Q9Y5Z4 205 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 COLEC10Q9Y6Z7 277 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 GVINP1Q7Z2Y8 2422 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 YKT6O15498 198 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 KLK8O60259 260 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 NOBOXO60393 691 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 SIX3O95343 332 aaPredicted RBP6.66□□□□□ -1.34
SCAF4-204ENST00000467731 VIPP01282 170 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 BPGMP07738 259 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 ANXA5P08758 320 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 SLC2A4P14672 509 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 ENDOUP21128 410 aaKnown RBP6.66□□□□□ -1.34
SCAF4-204ENST00000467731 FUT4P22083 530 aa6.66□□□□□ -1.34
SCAF4-204ENST00000467731 ATP5F1P24539 256 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms