RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	TRIM46	Q7Z4K8	759 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	ADHFE1	Q8IWW8	467 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	SCUBE1	Q8IWY4	988 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	ULK2	Q8IYT8	1036 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	DEFB107A	Q8IZN7	70 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	KY	Q8NBH2	561 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	PHC3	Q8NDX5	983 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	OR5K2	Q8NHB8	316 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	SELENOM	Q8WWX9	145 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	PDXP	Q96GD0	296 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	SCARF2	Q96GP6	870 aa	Predicted RBP	11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	WDR92	Q96MX6	357 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	OR2M4	Q96R27	311 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	NPAS2	Q99743	824 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	SLC25A23	Q9BV35	468 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	SGPP1	Q9BX95	441 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	FOXQ1	Q9C009	403 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	BRINP2	Q9C0B6	783 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	TRIT1	Q9H3H1	467 aa	Known RBP	11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	C6orf106	Q9H6K1	298 aa	Predicted RBP	11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	CARS2	Q9HA77	564 aa	Known RBP	11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	EFCAB1	Q9HAE3	211 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	CCDC177	Q9NQR7	707 aa	Predicted RBP	11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	SDR39U1	Q9NRG7	319 aa	Predicted RBP	11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	C2orf42	Q9NWW7	574 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	NDE1	Q9NXR1	346 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	NOP53	Q9NZM5	478 aa	Known RBP	11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	PLAGL1	Q9UM63	463 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	TDRKH	Q9Y2W6	561 aa	Known RBP	11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	DYRK1B	Q9Y463	629 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	PLEKHM1	Q9Y4G2	1056 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	CCL27	Q9Y4X3	112 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	CFAP20	Q9Y6A4	193 aa	Known RBP	11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	XIRP2	A4UGR9	3374 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	FANCM	Q8IYD8	2048 aa		11.93	□□□□□ -0.5
HDLBP-231	ENST00000467435	BBIP1	A8MTZ0	92 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	C10orf142	B7Z368	130 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	MRAS	O14807	208 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	SCAMP1	O15126	338 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	CIB2	O75838	187 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	WFS1	O76024	890 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	ATP6V1G2	O95670	118 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	RPL10	P27635	214 aa	Known RBP	11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	HTR1B	P28222	390 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	OXTR	P30559	389 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	HNF4A	P41235	474 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	CCR5	P51681	352 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	RAP1GDS1	P52306	607 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	STARD6	P59095	220 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	HMGCS1	Q01581	520 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	EMX2	Q04743	252 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	ZP2	Q05996	745 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	TBL3	Q12788	808 aa	Known RBP	11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	GRIK2	Q13002	908 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	STX5	Q13190	355 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	MAD2L1	Q13257	205 aa	Predicted RBP	11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	DOC2A	Q14183	400 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	GAS6	Q14393	721 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	SMU1	Q2TAY7	513 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	MMEL1	Q495T6	779 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	CAPRIN2	Q6IMN6	1127 aa	Known RBP	11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	ENPP7	Q6UWV6	458 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	TMPRSS11B	Q86T26	416 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	FUNDC1	Q8IVP5	155 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	PARP9	Q8IXQ6	854 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	LRRC56	Q8IYG6	542 aa	Predicted RBP	11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	RGL4	Q8IZJ4	473 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	DSEL	Q8IZU8	1212 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	OR1E3	Q8WZA6	343 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	MTFMT	Q96DP5	389 aa	Known RBP	11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	TOE1	Q96GM8	510 aa	Known RBP	11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	SHD	Q96IW2	340 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	CLPTM1L	Q96KA5	538 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	BMF	Q96LC9	184 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	C12orf66	Q96MD2	445 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	IL17F	Q96PD4	163 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	MRPL1	Q9BYD6	325 aa	Known RBP	11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	ACPT	Q9BZG2	426 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	LRTM1	Q9HBL6	345 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	ZIM2	Q9NZV7	527 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	SPATA7	Q9P0W8	599 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	WNT16	Q9UBV4	365 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	WDR37	Q9Y2I8	494 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	KCNE2	Q9Y6J6	123 aa		11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	11.92	□□□□□ -0.5
HDLBP-231	ENST00000467435		A0A088AWK7	358 aa		11.91	□□□□□ -0.5
HDLBP-231	ENST00000467435	PRR19	A6NJB7	356 aa		11.91	□□□□□ -0.5
HDLBP-231	ENST00000467435	PDZK1P1	A8MUH7	402 aa		11.91	□□□□□ -0.5
HDLBP-231	ENST00000467435		E7ENX8	843 aa		11.91	□□□□□ -0.5
HDLBP-231	ENST00000467435	FBP2	O00757	339 aa		11.91	□□□□□ -0.5
HDLBP-231	ENST00000467435	RSL1D1	O76021	490 aa	Known RBP	11.91	□□□□□ -0.5
HDLBP-231	ENST00000467435	APBB3	O95704	486 aa		11.91	□□□□□ -0.5
HDLBP-231	ENST00000467435	IGHV4-34	P06331	123 aa		11.91	□□□□□ -0.5
HDLBP-231	ENST00000467435	ERG	P11308	486 aa		11.91	□□□□□ -0.5
HDLBP-231	ENST00000467435	SLC2A4	P14672	509 aa		11.91	□□□□□ -0.5
HDLBP-231	ENST00000467435	GNAZ	P19086	355 aa		11.91	□□□□□ -0.5
HDLBP-231	ENST00000467435	CD22	P20273	847 aa		11.91	□□□□□ -0.5
HDLBP-231	ENST00000467435	IDS	P22304	550 aa		11.91	□□□□□ -0.5
HDLBP-231	ENST00000467435	CCND1	P24385	295 aa		11.91	□□□□□ -0.5
HDLBP-231	ENST00000467435	CD6	P30203	668 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms