RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 A0A1W2PPV9 198 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 PIPSLA2A3N6 862 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 KRT87PA6NCN2 255 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 HMGB1P1B2RPK0 211 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-205ENST00000466897 SUPT3HB4E1H0 165 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 STX16-NPEPL1H3BU86 382 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 UBXN8O00124 270 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 BTN3A3O00478 584 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 STX16O14662 325 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 TM9SF1O15321 606 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 TOX3O15405 576 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-205ENST00000466897 SUPT3HO75486 399 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 GUCA1CO95843 209 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 C9P02748 559 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 RPLP0P05388 317 aaKnown RBP14.69□□□□□ -0.06
NPHP4-205ENST00000466897 SBK3P0C264 359 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 CSF2RBP32927 897 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 SLC6A12P48065 614 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 ALDH18A1P54886 795 aaKnown RBP14.69□□□□□ -0.06
NPHP4-205ENST00000466897 CCL7P80098 99 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 SETDB1Q15047 1291 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 MBOAT1Q6ZNC8 495 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 SYTL1Q8IYJ3 562 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 Q8N9G6 341 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-205ENST00000466897 OR4D9Q8NGE8 314 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 JPH3Q8WXH2 748 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-205ENST00000466897 ZDHHC12Q96GR4 267 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 ATP6V1G3Q96LB4 118 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 IL17FQ96PD4 163 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 EGFL8Q99944 293 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 SGPP1Q9BX95 441 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 PCBD2Q9H0N5 130 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 CCDC177Q9NQR7 707 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-205ENST00000466897 HRASLS2Q9NWW9 162 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 CD274Q9NZQ7 290 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 SEMA5BQ9P283 1151 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 POMT2Q9UKY4 750 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 APOBEC2Q9Y235 224 aaKnown RBP14.69□□□□□ -0.06
NPHP4-205ENST00000466897 D6RAR5 112 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 SMIM24O75264 130 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 ZWINTO95229 277 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 CREB1P16220 341 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 TYRP1P17643 537 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 TAC1P20366 129 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 OAS2P29728 719 aaKnown RBP14.68□□□□□ -0.06
NPHP4-205ENST00000466897 PEBP1P30086 187 aaKnown RBP14.68□□□□□ -0.06
NPHP4-205ENST00000466897 NOVA1P51513 510 aaKnown RBP14.68□□□□□ -0.06
NPHP4-205ENST00000466897 TBPL1P62380 186 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 CFHR1Q03591 330 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 FASTKQ14296 549 aaKnown RBP14.68□□□□□ -0.06
NPHP4-205ENST00000466897 NAA25Q14CX7 972 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 ZXDCQ2QGD7 858 aaPredicted RBP14.68□□□□□ -0.06
NPHP4-205ENST00000466897 CAPN13Q6MZZ7 669 aaPredicted RBP14.68□□□□□ -0.06
NPHP4-205ENST00000466897 ARMC6Q6NXE6 501 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 C16orf46Q6P387 395 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 TMEM71Q6P5X7 295 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 CACTIN-AS1Q8N1I8 211 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 FBXO39Q8N4B4 442 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 LMNTD1Q8N9Z9 388 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 FLVCR1-AS1Q8TAF5 88 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 TCP10LQ8TDR4 215 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 ARL8AQ96BM9 186 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 CCDC126Q96EE4 140 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 GFM1Q96RP9 751 aaKnown RBP14.68□□□□□ -0.06
NPHP4-205ENST00000466897 MIPEPQ99797 713 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 PITPNM3Q9BZ71 974 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 ABCG4Q9H172 646 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 ACTR10Q9NZ32 417 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 CIDEBQ9UHD4 219 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 PCDHB11Q9Y5F2 797 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 KLK4Q9Y5K2 254 aa14.68□□□□□ -0.06
NPHP4-205ENST00000466897 TNPO3Q9Y5L0 923 aaKnown RBP14.68□□□□□ -0.06
NPHP4-205ENST00000466897 TLCD2A6NGC4 264 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 CAPN5O15484 640 aaPredicted RBP14.67□□□□□ -0.06
NPHP4-205ENST00000466897 CCNDBP1O95273 360 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 KCNK5O95279 499 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 ANKRD34CP0C6C1 535 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 FTH1P19P0C7X4 201 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 GFAPP14136 432 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 POLR2CP19387 275 aaPredicted RBP14.67□□□□□ -0.06
NPHP4-205ENST00000466897 ATP5F1P24539 256 aaPredicted RBP14.67□□□□□ -0.06
NPHP4-205ENST00000466897 ETV4P43268 484 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 MAGOHP61326 146 aaKnown RBP14.67□□□□□ -0.06
NPHP4-205ENST00000466897 SPIDRQ14159 915 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 PCBP2Q15366 365 aaKnown RBP eCLIP14.67□□□□□ -0.06
NPHP4-205ENST00000466897 SLC5A12Q1EHB4 618 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 PTCHD3Q3KNS1 767 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 TTMPQ5BVD1 217 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 CDCP2Q5VXM1 449 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 NKAIN2Q5VXU1 208 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 SPESP1Q6UW49 350 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 LCTLQ6UWM7 567 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 ZYG11AQ6WRX3 759 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 LRRC70Q7Z2Q7 622 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 PRSS42Q7Z5A4 293 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 SLC22A9Q8IVM8 553 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 OR2A1Q8NGT9 310 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 NCSTNQ92542 709 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 EXT2Q93063 718 aa14.67□□□□□ -0.06
NPHP4-205ENST00000466897 OR2A14Q96R47 310 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms