RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 B4GAT1O43505 415 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 KDM1AO60341 852 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 IPO13O94829 963 aaKnown RBP10.78□□□□□ -0.68
VCP-204ENST00000466100 SIX3O95343 332 aaPredicted RBP10.78□□□□□ -0.68
VCP-204ENST00000466100 S100BP04271 92 aaPredicted RBP10.78□□□□□ -0.68
VCP-204ENST00000466100 CHRM5P08912 532 aaPredicted RBP10.78□□□□□ -0.68
VCP-204ENST00000466100 TAC1P20366 129 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 KCNA4P22459 653 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 ACP1P24666 158 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 ALDH3A1P30838 453 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 CAPZBP47756 277 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 DNAJB13P59910 316 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 NAE1Q13564 534 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 PLCL1Q15111 1095 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 PTCHD3Q3KNS1 767 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 FBXO48Q5FWF7 155 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 CES4AQ5XG92 561 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 METTL2BQ6P1Q9 378 aaKnown RBP10.78□□□□□ -0.68
VCP-204ENST00000466100 EFL1Q7Z2Z2 1120 aaKnown RBP10.78□□□□□ -0.68
VCP-204ENST00000466100 AMIGO1Q86WK6 493 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 C10orf107Q8IVU9 208 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 OR4E2Q8NGC2 313 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 RHBDD1Q8TEB9 315 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 SETD7Q8WTS6 366 aaKnown RBP10.78□□□□□ -0.68
VCP-204ENST00000466100 SMPDL3AQ92484 453 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 ESAMQ96AP7 390 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 PHF21BQ96EK2 531 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 L3HYPDHQ96EM0 354 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 TMEM237Q96Q45 408 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 OR4K3Q96R72 315 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 SLC38A3Q99624 504 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 PITPNM3Q9BZ71 974 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 CD244Q9BZW8 370 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 ATG10Q9H0Y0 220 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 SRMSQ9H3Y6 488 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 MLXIPLQ9NP71 852 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 SPHK1Q9NYA1 384 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 NKIRAS1Q9NYS0 192 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 WWOXQ9NZC7 414 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 PABPN1LA6NDY0 278 aaKnown RBP10.77□□□□□ -0.69
VCP-204ENST00000466100 ZNF839A8K0R7 811 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 E2F3O00716 465 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 BIRC5O15392 142 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 GFRA3O60609 400 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 STK16O75716 305 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 UBXN7O94888 489 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 LDOC1O95751 146 aaPredicted RBP10.77□□□□□ -0.69
VCP-204ENST00000466100 PROS1P07225 676 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 FGF3P11487 239 aaPredicted RBP10.77□□□□□ -0.69
VCP-204ENST00000466100 CHN1P15882 459 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 CKMT2P17540 419 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 EPORP19235 508 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 PSMB5P28074 263 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 CSF2RBP32927 897 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 GDF5P43026 501 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 HSPA7P48741 367 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 ACADVLP49748 655 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 DUSP3P51452 185 aaPredicted RBP10.77□□□□□ -0.69
VCP-204ENST00000466100 OR1D5P58170 312 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 PPP1CAP62136 330 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 HERVK_113P63132 956 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 CFHR1Q03591 330 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 SQSTM1Q13501 440 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 UNC50Q53HI1 259 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 ZNF678Q5SXM1 525 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 LIPMQ5VYY2 423 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 SUSD1Q6UWL2 747 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 LRRC70Q7Z2Q7 622 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 SLC22A9Q8IVM8 553 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 SYTL1Q8IYJ3 562 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 RAB42Q8N4Z0 105 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 C2orf73Q8N5S3 287 aaPredicted RBP10.77□□□□□ -0.69
VCP-204ENST00000466100 CCDC63Q8NA47 563 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 IFI44Q8TCB0 444 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 MGARPQ8TDB4 240 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 ZNF483Q8TF39 744 aaPredicted RBP10.77□□□□□ -0.69
VCP-204ENST00000466100 PYCR2Q96C36 320 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 CCDC126Q96EE4 140 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 ERVK-6Q9BXR3 956 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 RAB33BQ9H082 229 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 EPB41L1Q9H4G0 881 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 GSTO2Q9H4Y5 243 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 INTS7Q9NVH2 962 aaKnown RBP10.77□□□□□ -0.69
VCP-204ENST00000466100 KCNK4Q9NYG8 393 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 FTSJ1Q9UET6 329 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 LNPEPQ9UIQ6 1025 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 PCTPQ9UKL6 214 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 SH2B3Q9UQQ2 575 aa10.77□□□□□ -0.69
VCP-204ENST00000466100 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.76□□□□□ -0.69
VCP-204ENST00000466100 CPED1A4D0V7 1026 aa10.76□□□□□ -0.69
VCP-204ENST00000466100 OR6C74A6NCV1 312 aa10.76□□□□□ -0.69
VCP-204ENST00000466100 K7EPI3 171 aa10.76□□□□□ -0.69
VCP-204ENST00000466100 TM4SF5O14894 197 aa10.76□□□□□ -0.69
VCP-204ENST00000466100 PRAMEF4O60810 478 aa10.76□□□□□ -0.69
VCP-204ENST00000466100 WDR47O94967 919 aa10.76□□□□□ -0.69
VCP-204ENST00000466100 GP1BAP07359 652 aa10.76□□□□□ -0.69
VCP-204ENST00000466100 NPPBP16860 134 aa10.76□□□□□ -0.69
VCP-204ENST00000466100 POLR2CP19387 275 aaPredicted RBP10.76□□□□□ -0.69
VCP-204ENST00000466100 IMPDH1P20839 514 aa10.76□□□□□ -0.69
VCP-204ENST00000466100 CCND1P24385 295 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms