RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 GPR26Q8NDV2 337 aa8.98□□□□□ -0.97
APP-213ENST00000464867 SLC30A5Q8TAD4 765 aa8.98□□□□□ -0.97
APP-213ENST00000464867 PSMF1Q92530 271 aa8.98□□□□□ -0.97
APP-213ENST00000464867 PWWP2AQ96N64 755 aa8.98□□□□□ -0.97
APP-213ENST00000464867 CRB3Q9BUF7 120 aa8.98□□□□□ -0.97
APP-213ENST00000464867 XPO4Q9C0E2 1151 aaKnown RBP8.98□□□□□ -0.97
APP-213ENST00000464867 VPS16Q9H269 839 aa8.98□□□□□ -0.97
APP-213ENST00000464867 SLC26A1Q9H2B4 701 aa8.98□□□□□ -0.97
APP-213ENST00000464867 CLSTN2Q9H4D0 955 aa8.98□□□□□ -0.97
APP-213ENST00000464867 ZWILCHQ9H900 591 aa8.98□□□□□ -0.97
APP-213ENST00000464867 NOCTQ9UK39 431 aaKnown RBP8.98□□□□□ -0.97
APP-213ENST00000464867 RNF6Q9Y252 685 aa8.98□□□□□ -0.97
APP-213ENST00000464867 SONP18583 2426 aaKnown RBP8.97□□□□□ -0.97
APP-213ENST00000464867 CHD3Q12873 2000 aaKnown RBP8.97□□□□□ -0.97
APP-213ENST00000464867 A0A1B0GX78 115 aa8.97□□□□□ -0.97
APP-213ENST00000464867 USP27XA6NNY8 438 aa8.97□□□□□ -0.97
APP-213ENST00000464867 ADAM10O14672 748 aa8.97□□□□□ -0.97
APP-213ENST00000464867 PRPSAP2O60256 369 aa8.97□□□□□ -0.97
APP-213ENST00000464867 KLK8O60259 260 aa8.97□□□□□ -0.97
APP-213ENST00000464867 WISP2O76076 250 aa8.97□□□□□ -0.97
APP-213ENST00000464867 IFNA2P01563 188 aa8.97□□□□□ -0.97
APP-213ENST00000464867 SLC4A1P02730 911 aa8.97□□□□□ -0.97
APP-213ENST00000464867 CALB1P05937 261 aa8.97□□□□□ -0.97
APP-213ENST00000464867 PCSK2P16519 638 aa8.97□□□□□ -0.97
APP-213ENST00000464867 PBLDP30039 288 aaPredicted RBP8.97□□□□□ -0.97
APP-213ENST00000464867 HCAR3P49019 387 aa8.97□□□□□ -0.97
APP-213ENST00000464867 ZNF33BQ06732 778 aa8.97□□□□□ -0.97
APP-213ENST00000464867 SYCP1Q15431 976 aa8.97□□□□□ -0.97
APP-213ENST00000464867 DEFB110Q30KQ9 67 aa8.97□□□□□ -0.97
APP-213ENST00000464867 TXNRD3NBQ6F5E7 133 aa8.97□□□□□ -0.97
APP-213ENST00000464867 ISM2Q6H9L7 571 aa8.97□□□□□ -0.97
APP-213ENST00000464867 DNAJC24Q6P3W2 148 aa8.97□□□□□ -0.97
APP-213ENST00000464867 DCUN1D2Q6PH85 259 aa8.97□□□□□ -0.97
APP-213ENST00000464867 TMCO3Q6UWJ1 677 aa8.97□□□□□ -0.97
APP-213ENST00000464867 C16orf47Q6ZP98 133 aaPredicted RBP8.97□□□□□ -0.97
APP-213ENST00000464867 FAM83HQ6ZRV2 1179 aaPredicted RBP8.97□□□□□ -0.97
APP-213ENST00000464867 CDC20BQ86Y33 519 aa8.97□□□□□ -0.97
APP-213ENST00000464867 CPSF7Q8N684 471 aaKnown RBP8.97□□□□□ -0.97
APP-213ENST00000464867 C3orf20Q8ND61 904 aa8.97□□□□□ -0.97
APP-213ENST00000464867 ZNF653Q96CK0 615 aa8.97□□□□□ -0.97
APP-213ENST00000464867 FAM46AQ96IP4 442 aaKnown RBP8.97□□□□□ -0.97
APP-213ENST00000464867 VPS35Q96QK1 796 aa8.97□□□□□ -0.97
APP-213ENST00000464867 GPR63Q9BZJ6 419 aa8.97□□□□□ -0.97
APP-213ENST00000464867 SLC22A11Q9NSA0 550 aa8.97□□□□□ -0.97
APP-213ENST00000464867 IL1RAPL1Q9NZN1 696 aa8.97□□□□□ -0.97
APP-213ENST00000464867 CTNND2Q9UQB3 1225 aa8.97□□□□□ -0.97
APP-213ENST00000464867 HRNRQ86YZ3 2850 aaPredicted RBP8.96□□□□□ -0.97
APP-213ENST00000464867 KLHL33A6NCF5 533 aa8.96□□□□□ -0.98
APP-213ENST00000464867 H3BMH7 237 aa8.96□□□□□ -0.98
APP-213ENST00000464867 BTN3A1O00481 513 aa8.96□□□□□ -0.98
APP-213ENST00000464867 EREGO14944 169 aa8.96□□□□□ -0.98
APP-213ENST00000464867 ATE1O95260 518 aa8.96□□□□□ -0.98
APP-213ENST00000464867 CYP1A1P04798 512 aaPredicted RBP8.96□□□□□ -0.98
APP-213ENST00000464867 TPOP07202 933 aa8.96□□□□□ -0.98
APP-213ENST00000464867 ICAM2P13598 275 aa8.96□□□□□ -0.98
APP-213ENST00000464867 ARL4AP40617 200 aa8.96□□□□□ -0.98
APP-213ENST00000464867 PEX19P40855 299 aa8.96□□□□□ -0.98
APP-213ENST00000464867 KIR2DL3P43628 341 aa8.96□□□□□ -0.98
APP-213ENST00000464867 TMPRSS15P98073 1019 aa8.96□□□□□ -0.98
APP-213ENST00000464867 DSC2Q02487 901 aa8.96□□□□□ -0.98
APP-213ENST00000464867 OCA2Q04671 838 aa8.96□□□□□ -0.98
APP-213ENST00000464867 KHDC1Q4VXA5 237 aaKnown RBP8.96□□□□□ -0.98
APP-213ENST00000464867 HMBOX1Q6NT76 420 aa8.96□□□□□ -0.98
APP-213ENST00000464867 PODNL1Q6PEZ8 512 aa8.96□□□□□ -0.98
APP-213ENST00000464867 TMEM220Q6QAJ8 160 aa8.96□□□□□ -0.98
APP-213ENST00000464867 ARSKQ6UWY0 536 aa8.96□□□□□ -0.98
APP-213ENST00000464867 TMEM178AQ8NBL3 297 aa8.96□□□□□ -0.98
APP-213ENST00000464867 HDAC10Q969S8 669 aa8.96□□□□□ -0.98
APP-213ENST00000464867 COX4I2Q96KJ9 171 aa8.96□□□□□ -0.98
APP-213ENST00000464867 MCEEQ96PE7 176 aa8.96□□□□□ -0.98
APP-213ENST00000464867 FERD3LQ96RJ6 166 aa8.96□□□□□ -0.98
APP-213ENST00000464867 BDH2Q9BUT1 245 aa8.96□□□□□ -0.98
APP-213ENST00000464867 KRTAP9-2Q9BYQ4 174 aa8.96□□□□□ -0.98
APP-213ENST00000464867 CEP41Q9BYV8 373 aa8.96□□□□□ -0.98
APP-213ENST00000464867 CHRNA10Q9GZZ6 450 aa8.96□□□□□ -0.98
APP-213ENST00000464867 FAM60AQ9NP50 221 aa8.96□□□□□ -0.98
APP-213ENST00000464867 SIX2Q9NPC8 291 aa8.96□□□□□ -0.98
APP-213ENST00000464867 ACTR10Q9NZ32 417 aa8.96□□□□□ -0.98
APP-213ENST00000464867 NFKBIL1Q9UBC1 381 aaPredicted RBP8.96□□□□□ -0.98
APP-213ENST00000464867 STOML1Q9UBI4 398 aa8.96□□□□□ -0.98
APP-213ENST00000464867 SOX13Q9UN79 622 aa8.96□□□□□ -0.98
APP-213ENST00000464867 PLCL2Q9UPR0 1127 aa8.96□□□□□ -0.98
APP-213ENST00000464867 L3MBTL1Q9Y468 752 aa8.96□□□□□ -0.98
APP-213ENST00000464867 OR2AG2A6NM03 316 aa8.95□□□□□ -0.98
APP-213ENST00000464867 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.95□□□□□ -0.98
APP-213ENST00000464867 BTN3A3O00478 584 aa8.95□□□□□ -0.98
APP-213ENST00000464867 SMAD7O15105 426 aaKnown RBP8.95□□□□□ -0.98
APP-213ENST00000464867 TNFRSF21O75509 655 aa8.95□□□□□ -0.98
APP-213ENST00000464867 ONECUT2O95948 504 aa8.95□□□□□ -0.98
APP-213ENST00000464867 MT-CYBP00156 380 aaPredicted RBP8.95□□□□□ -0.98
APP-213ENST00000464867 PRLP01236 227 aa8.95□□□□□ -0.98
APP-213ENST00000464867 SERPINB6P35237 376 aa8.95□□□□□ -0.98
APP-213ENST00000464867 PTGS2P35354 604 aa8.95□□□□□ -0.98
APP-213ENST00000464867 ZNF165P49910 485 aa8.95□□□□□ -0.98
APP-213ENST00000464867 GSCP56915 257 aaPredicted RBP8.95□□□□□ -0.98
APP-213ENST00000464867 CDR2Q01850 454 aa8.95□□□□□ -0.98
APP-213ENST00000464867 PCBP2Q15366 365 aaKnown RBP eCLIP8.95□□□□□ -0.98
APP-213ENST00000464867 CAMK4Q16566 473 aa8.95□□□□□ -0.98
APP-213ENST00000464867 CA9Q16790 459 aa8.95□□□□□ -0.98
APP-213ENST00000464867 LDLRAP1Q5SW96 308 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms