RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 UBTD2Q8WUN7 234 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 MYDGFQ969H8 173 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 IGSF8Q969P0 613 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 CCDC32Q9BV29 185 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 C6orf62Q9GZU0 229 aaPredicted RBP7.12□□□□□ -1.27
USP48-206ENST00000464577 IPPKQ9H8X2 491 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 ZNF408Q9H9D4 720 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 LRTM1Q9HBL6 345 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 SERHLQ9NQF3 203 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 KRT84Q9NSB2 600 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.12□□□□□ -1.27
USP48-206ENST00000464577 FKBP14Q9NWM8 211 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 AASSQ9UDR5 926 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 TRPS1Q9UHF7 1281 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 PSORS1C1Q9UIG5 152 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 RPS6KA6Q9UK32 745 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 ABCG2Q9UNQ0 655 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 GRIP1Q9Y3R0 1128 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 PCDHGB6Q9Y5F9 930 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 ARL5CA6NH57 179 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 GOLGA8CPA6NN73 597 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 ADM5C9JUS6 153 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 ARVCFO00192 962 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 KMOO15229 486 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 HOXC11O43248 304 aaPredicted RBP7.12□□□□□ -1.27
USP48-206ENST00000464577 ZW10O43264 779 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 PCDHGA12O60330 932 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 FABP3P05413 133 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 TRAPPC2P0DI81 140 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 TRAPPC2BP0DI82 140 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 ALOX12P18054 663 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 LPOP22079 712 aaPredicted RBP7.12□□□□□ -1.27
USP48-206ENST00000464577 CXCR2P25025 360 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 PTPN6P29350 595 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 ACVRL1P37023 503 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 PTGER3P43115 390 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 CLCN7P51798 805 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 AFF1P51825 1210 aaKnown RBP7.12□□□□□ -1.27
USP48-206ENST00000464577 ITGA1P56199 1179 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 CARTPTQ16568 116 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 DDR2Q16832 855 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 TIGD6Q17RP2 521 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 PRSS36Q5K4E3 855 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 PSAPL1Q6NUJ1 521 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 ERICH5Q6P6B1 374 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 CD300LGQ6UXG3 332 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 TAS2R42Q7RTR8 314 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 SERPINA11Q86U17 422 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 HORMAD1Q86X24 394 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 PIANPQ8IYJ0 282 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 UBQLNLQ8IYU4 475 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 ENTHD1Q8IYW4 607 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 SLC22A15Q8IZD6 547 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 STK40Q8N2I9 435 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 CPA6Q8N4T0 437 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 KRTCAP2Q8N6L1 136 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 OR6F1Q8NGZ6 308 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 SETD6Q8TBK2 473 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 DNASE1L2Q92874 299 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 HRASLS5Q96KN8 279 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 HBEGFQ99075 208 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 RAD9AQ99638 391 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 COPS4Q9BT78 406 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 SLC29A3Q9BZD2 475 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 P2RY12Q9H244 342 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 SLC6A13Q9NSD5 602 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 FBXL12Q9NXK8 326 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 PDP1Q9P0J1 537 aaPredicted RBP7.12□□□□□ -1.27
USP48-206ENST00000464577 KIF17Q9P2E2 1029 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 TRAPPC4Q9Y296 219 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 DHRS7Q9Y394 339 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 ARIH1Q9Y4X5 557 aaPredicted RBP7.12□□□□□ -1.27
USP48-206ENST00000464577 E5RI56 91 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 H7C0S8 307 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 MANBAO00462 879 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 FFAR2O15552 330 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 OR1I1O60431 355 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 PGLSO95336 258 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 CDK1P06493 297 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 DBTP11182 482 aaKnown RBP7.11□□□□□ -1.27
USP48-206ENST00000464577 TYMPP19971 482 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 GTF2E2P29084 291 aaKnown RBP7.11□□□□□ -1.27
USP48-206ENST00000464577 MC4RP32245 332 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 S100A3P33764 101 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 DDOSTP39656 456 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 HTR3AP46098 478 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 CDKN1CP49918 316 aaPredicted RBP7.11□□□□□ -1.27
USP48-206ENST00000464577 UGT2B15P54855 530 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 CLDN8P56748 225 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 ARPC4P59998 168 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 RPP38P78345 283 aaKnown RBP7.11□□□□□ -1.27
USP48-206ENST00000464577 IL1RL1Q01638 556 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 CREMQ03060 361 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 NPRL3Q12980 569 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 SYT16Q17RD7 645 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 C18orf21Q32NC0 220 aaPredicted RBP7.11□□□□□ -1.27
USP48-206ENST00000464577 ATAD3CQ5T2N8 411 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 RAP1GAP2Q684P5 730 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 OVOS1Q6IE37 1185 aa7.11□□□□□ -1.27
USP48-206ENST00000464577 TTC23LQ6PF05 361 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms