RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 CACNA2D3Q8IZS8 1091 aa16.45■□□□□ 0.22
VPS52-215ENST00000464425 IL22RA1Q8N6P7 574 aa16.45■□□□□ 0.22
VPS52-215ENST00000464425 OR2L8Q8NGY9 312 aa16.45■□□□□ 0.22
VPS52-215ENST00000464425 MAGEC3Q8TD91 643 aa16.45■□□□□ 0.22
VPS52-215ENST00000464425 CCNL2Q96S94 520 aaPredicted RBP16.45■□□□□ 0.22
VPS52-215ENST00000464425 RBBP8Q99708 897 aa16.45■□□□□ 0.22
VPS52-215ENST00000464425 TAS2R13Q9NYV9 303 aa16.45■□□□□ 0.22
VPS52-215ENST00000464425 FETUBQ9UGM5 382 aa16.45■□□□□ 0.22
VPS52-215ENST00000464425 BTRCQ9Y297 605 aa16.45■□□□□ 0.22
VPS52-215ENST00000464425 VWA7Q9Y334 891 aa16.45■□□□□ 0.22
VPS52-215ENST00000464425 EFSO43281 561 aa16.44■□□□□ 0.22
VPS52-215ENST00000464425 PSIP1O75475 530 aaKnown RBP16.44■□□□□ 0.22
VPS52-215ENST00000464425 KIAA0754O94854 1291 aa16.44■□□□□ 0.22
VPS52-215ENST00000464425 TIAF1O95411 115 aa16.44■□□□□ 0.22
VPS52-215ENST00000464425 SPRP35270 261 aaPredicted RBP16.44■□□□□ 0.22
VPS52-215ENST00000464425 ATP1A2P50993 1020 aa16.44■□□□□ 0.22
VPS52-215ENST00000464425 TMPRSS3P57727 454 aa16.44■□□□□ 0.22
VPS52-215ENST00000464425 KIR2DS3Q14952 304 aa16.44■□□□□ 0.22
VPS52-215ENST00000464425 ARHGAP40Q5TG30 622 aa16.44■□□□□ 0.22
VPS52-215ENST00000464425 HECTD2Q5U5R9 776 aa16.44■□□□□ 0.22
VPS52-215ENST00000464425 FAM45BPQ6NSW5 357 aa16.44■□□□□ 0.22
VPS52-215ENST00000464425 PWWP2BQ6NUJ5 590 aa16.44■□□□□ 0.22
VPS52-215ENST00000464425 PAQR3Q6TCH7 311 aa16.44■□□□□ 0.22
VPS52-215ENST00000464425 NEK10Q6ZWH5 1172 aa16.44■□□□□ 0.22
VPS52-215ENST00000464425 PIWIL4Q7Z3Z4 852 aaKnown RBP16.44■□□□□ 0.22
VPS52-215ENST00000464425 NLGN4XQ8N0W4 816 aa16.44■□□□□ 0.22
VPS52-215ENST00000464425 CNPY4Q8N129 248 aa16.44■□□□□ 0.22
VPS52-215ENST00000464425 RAB42Q8N4Z0 105 aa16.44■□□□□ 0.22
VPS52-215ENST00000464425 NLGN4YQ8NFZ3 816 aaPredicted RBP16.44■□□□□ 0.22
VPS52-215ENST00000464425 FAM45AQ8TCE6 357 aa16.44■□□□□ 0.22
VPS52-215ENST00000464425 DENND1AQ8TEH3 1009 aa16.44■□□□□ 0.22
VPS52-215ENST00000464425 EEF1AKMT1Q8WVE0 214 aa16.44■□□□□ 0.22
VPS52-215ENST00000464425 PRORYQ9H606 182 aa16.44■□□□□ 0.22
VPS52-215ENST00000464425 LNPEPQ9UIQ6 1025 aa16.44■□□□□ 0.22
VPS52-215ENST00000464425 RALYQ9UKM9 306 aaKnown RBP16.44■□□□□ 0.22
VPS52-215ENST00000464425 SSUH2Q9Y2M2 353 aa16.44■□□□□ 0.22
VPS52-215ENST00000464425 KLHL20Q9Y2M5 609 aa16.44■□□□□ 0.22
VPS52-215ENST00000464425 TMEM184BQ9Y519 407 aaPredicted RBP16.44■□□□□ 0.22
VPS52-215ENST00000464425 A0A0J9YY10 115 aa16.43■□□□□ 0.22
VPS52-215ENST00000464425 SYF2O95926 243 aaKnown RBP16.43■□□□□ 0.22
VPS52-215ENST00000464425 CATP04040 527 aaKnown RBP16.43■□□□□ 0.22
VPS52-215ENST00000464425 MPC1LP0DKB6 136 aa16.43■□□□□ 0.22
VPS52-215ENST00000464425 CBSLP0DN79 551 aa16.43■□□□□ 0.22
VPS52-215ENST00000464425 ENO3P13929 434 aaPredicted RBP16.43■□□□□ 0.22
VPS52-215ENST00000464425 SAT1P21673 171 aa16.43■□□□□ 0.22
VPS52-215ENST00000464425 CBSP35520 551 aa16.43■□□□□ 0.22
VPS52-215ENST00000464425 UCNP55089 124 aa16.43■□□□□ 0.22
VPS52-215ENST00000464425 FASTKQ14296 549 aaKnown RBP16.43■□□□□ 0.22
VPS52-215ENST00000464425 EFTUD2Q15029 972 aaKnown RBP eCLIP16.43■□□□□ 0.222e-6■■■■□ 25.9
VPS52-215ENST00000464425 SF1Q15637 639 aaKnown RBP16.43■□□□□ 0.22
VPS52-215ENST00000464425 ZIC1Q15915 447 aa16.43■□□□□ 0.22
VPS52-215ENST00000464425 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.43■□□□□ 0.22
VPS52-215ENST00000464425 CYB5D1Q6P9G0 228 aa16.43■□□□□ 0.22
VPS52-215ENST00000464425 CCDC81Q6ZN84 652 aa16.43■□□□□ 0.22
VPS52-215ENST00000464425 CDHR3Q6ZTQ4 885 aa16.43■□□□□ 0.22
VPS52-215ENST00000464425 BPHLQ86WA6 291 aaPredicted RBP16.43■□□□□ 0.22
VPS52-215ENST00000464425 MREGQ8N565 214 aa16.43■□□□□ 0.22
VPS52-215ENST00000464425 C19orf47Q8N9M1 422 aaKnown RBP16.43■□□□□ 0.22
VPS52-215ENST00000464425 GALNT6Q8NCL4 622 aa16.43■□□□□ 0.22
VPS52-215ENST00000464425 MYRIPQ8NFW9 859 aa16.43■□□□□ 0.22
VPS52-215ENST00000464425 OR9A1PQ8NGU1 263 aa16.43■□□□□ 0.22
VPS52-215ENST00000464425 UBLCP1Q8WVY7 318 aaPredicted RBP16.43■□□□□ 0.22
VPS52-215ENST00000464425 SLC44A1Q8WWI5 657 aa16.43■□□□□ 0.22
VPS52-215ENST00000464425 ASB11Q8WXH4 323 aa16.43■□□□□ 0.22
VPS52-215ENST00000464425 ZNF501Q96CX3 271 aaPredicted RBP16.43■□□□□ 0.22
VPS52-215ENST00000464425 VPS39Q96JC1 886 aa16.43■□□□□ 0.22
VPS52-215ENST00000464425 PKP4Q99569 1192 aa16.43■□□□□ 0.22
VPS52-215ENST00000464425 OLFM1Q99784 485 aa16.43■□□□□ 0.22
VPS52-215ENST00000464425 CCDC77Q9BR77 488 aa16.43■□□□□ 0.22
VPS52-215ENST00000464425 RAB11FIP5Q9BXF6 653 aa16.43■□□□□ 0.22
VPS52-215ENST00000464425 TWSG1Q9GZX9 223 aa16.43■□□□□ 0.22
VPS52-215ENST00000464425 FAM60AQ9NP50 221 aa16.43■□□□□ 0.22
VPS52-215ENST00000464425 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.43■□□□□ 0.22
VPS52-215ENST00000464425 ZNF180Q9UJW8 692 aa16.43■□□□□ 0.22
VPS52-215ENST00000464425 FAM95CA0A1B0GW59 222 aa16.42■□□□□ 0.22
VPS52-215ENST00000464425 CCDC151A5D8V7 595 aa16.42■□□□□ 0.22
VPS52-215ENST00000464425 TMEM150CB9EJG8 249 aa16.42■□□□□ 0.22
VPS52-215ENST00000464425 DLGAP3O95886 979 aa16.42■□□□□ 0.22
VPS52-215ENST00000464425 NTRK1P04629 796 aa16.42■□□□□ 0.22
VPS52-215ENST00000464425 FDXRP22570 491 aa16.42■□□□□ 0.22
VPS52-215ENST00000464425 MAP4P27816 1152 aaKnown RBP16.42■□□□□ 0.22
VPS52-215ENST00000464425 HSD17B3P37058 310 aa16.42■□□□□ 0.22
VPS52-215ENST00000464425 POU4F1Q01851 419 aa16.42■□□□□ 0.22
VPS52-215ENST00000464425 VAC14Q08AM6 782 aa16.42■□□□□ 0.22
VPS52-215ENST00000464425 PDAP1Q13442 181 aaKnown RBP16.42■□□□□ 0.22
VPS52-215ENST00000464425 UAP1Q16222 522 aaPredicted RBP16.42■□□□□ 0.22
VPS52-215ENST00000464425 SLC5A12Q1EHB4 618 aa16.42■□□□□ 0.22
VPS52-215ENST00000464425 PRAMEF17Q5VTA0 474 aa16.42■□□□□ 0.22
VPS52-215ENST00000464425 C6orf15Q6UXA7 325 aaPredicted RBP16.42■□□□□ 0.22
VPS52-215ENST00000464425 UBE2R2Q712K3 238 aaPredicted RBP16.42■□□□□ 0.22
VPS52-215ENST00000464425 UHMK1Q8TAS1 419 aaKnown RBP16.42■□□□□ 0.22
VPS52-215ENST00000464425 SLC22A18Q96BI1 424 aa16.42■□□□□ 0.22
VPS52-215ENST00000464425 GPR22Q99680 433 aa16.42■□□□□ 0.22
VPS52-215ENST00000464425 DHRS4Q9BTZ2 278 aa16.42■□□□□ 0.22
VPS52-215ENST00000464425 FANCEQ9HB96 536 aa16.42■□□□□ 0.22
VPS52-215ENST00000464425 IKBKGQ9Y6K9 419 aa16.42■□□□□ 0.22
VPS52-215ENST00000464425 EXOC1LA0A1B0GW35 172 aa16.41■□□□□ 0.22
VPS52-215ENST00000464425 GFYI3L273 518 aa16.41■□□□□ 0.22
VPS52-215ENST00000464425 MYO1CO00159 1063 aa16.41■□□□□ 0.22
VPS52-215ENST00000464425 EIF3FO00303 357 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms