RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 C2orf73Q8N5S3 287 aaPredicted RBP19.12■□□□□ 0.65
COL9A3-204ENST00000463487 DENND1AQ8TEH3 1009 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 AENQ8WTP8 325 aaKnown RBP19.12■□□□□ 0.65
COL9A3-204ENST00000463487 GATA6Q92908 595 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 UBXN10Q96LJ8 280 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 ZNF578Q96N58 590 aaPredicted RBP19.12■□□□□ 0.65
COL9A3-204ENST00000463487 TEFMQ96QE5 360 aaKnown RBP19.12■□□□□ 0.65
COL9A3-204ENST00000463487 TAAR9Q96RI9 348 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 ZPBPQ9BS86 351 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 PCBD2Q9H0N5 130 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 SLC39A1Q9NY26 324 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 SPHK1Q9NYA1 384 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 UTP6Q9NYH9 597 aaKnown RBP19.12■□□□□ 0.65
COL9A3-204ENST00000463487 RAB21Q9UL25 225 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 NCOR2Q9Y618 2525 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 A0A096LPK6 155 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 SLC9B1P1A6NJY1 282 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 POLR1CO15160 346 aaPredicted RBP19.11■□□□□ 0.65
COL9A3-204ENST00000463487 BRINP1O60477 761 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 WISP3O95389 354 aaPredicted RBP19.11■□□□□ 0.65
COL9A3-204ENST00000463487 ANXA5P08758 320 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 SLC35E2BP0CK96 405 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 HGFP14210 728 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 ITIH1P19827 911 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 CMPK1P30085 196 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 HNMTP50135 292 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 FOXM1Q08050 763 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 IL11RAQ14626 422 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 PHKG1Q16816 387 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 ADGRD1Q6QNK2 874 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 CEACAM20Q6UY09 585 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 BPHLQ86WA6 291 aaPredicted RBP19.11■□□□□ 0.65
COL9A3-204ENST00000463487 ZNF480Q8WV37 535 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 ANKRD49Q8WVL7 239 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 N4BP2L2Q92802 583 aaPredicted RBP19.11■□□□□ 0.65
COL9A3-204ENST00000463487 TCTN2Q96GX1 697 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 CABS1Q96KC9 395 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 SLC46A1Q96NT5 459 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 NRTNQ99748 197 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 EGFL8Q99944 293 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 DHRS4Q9BTZ2 278 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 DDA1Q9BW61 102 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 TWSG1Q9GZX9 223 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 CCDC177Q9NQR7 707 aaPredicted RBP19.11■□□□□ 0.65
COL9A3-204ENST00000463487 FBXO8Q9NRD0 319 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 STOX2Q9P2F5 926 aaPredicted RBP19.11■□□□□ 0.65
COL9A3-204ENST00000463487 DKK4Q9UBT3 224 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 BTRCQ9Y297 605 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 OARD1Q9Y530 152 aa19.11■□□□□ 0.65
COL9A3-204ENST00000463487 TRIM49D1C9J1S8 452 aa19.1■□□□□ 0.65
COL9A3-204ENST00000463487 CDC7O00311 574 aa19.1■□□□□ 0.65
COL9A3-204ENST00000463487 ERLIN1O75477 346 aa19.1■□□□□ 0.65
COL9A3-204ENST00000463487 S100BP04271 92 aaPredicted RBP19.1■□□□□ 0.65
COL9A3-204ENST00000463487 C2P06681 752 aa19.1■□□□□ 0.65
COL9A3-204ENST00000463487 FGF3P11487 239 aaPredicted RBP19.1■□□□□ 0.65
COL9A3-204ENST00000463487 CCL4P13236 92 aa19.1■□□□□ 0.65
COL9A3-204ENST00000463487 IMPA1P29218 277 aa19.1■□□□□ 0.65
COL9A3-204ENST00000463487 HSD17B3P37058 310 aa19.1■□□□□ 0.65
COL9A3-204ENST00000463487 CDKL1Q00532 357 aa19.1■□□□□ 0.65
COL9A3-204ENST00000463487 MC2RQ01718 297 aa19.1■□□□□ 0.65
COL9A3-204ENST00000463487 CYP4F3Q08477 520 aa19.1■□□□□ 0.65
COL9A3-204ENST00000463487 IFFO1Q0D2I5 559 aa19.1■□□□□ 0.65
COL9A3-204ENST00000463487 TSNQ15631 228 aaKnown RBP19.1■□□□□ 0.65
COL9A3-204ENST00000463487 SBSNQ6UWP8 590 aa19.1■□□□□ 0.65
COL9A3-204ENST00000463487 D2HGDHQ8N465 521 aa19.1■□□□□ 0.65
COL9A3-204ENST00000463487 C19orf47Q8N9M1 422 aaKnown RBP19.1■□□□□ 0.65
COL9A3-204ENST00000463487 LMNTD1Q8N9Z9 388 aa19.1■□□□□ 0.65
COL9A3-204ENST00000463487 OR8K5Q8NH50 307 aa19.1■□□□□ 0.65
COL9A3-204ENST00000463487 STAG3L4Q8TBR4 150 aa19.1■□□□□ 0.65
COL9A3-204ENST00000463487 DLG3Q92796 817 aa19.1■□□□□ 0.65
COL9A3-204ENST00000463487 KIAA1191Q96A73 305 aa19.1■□□□□ 0.65
COL9A3-204ENST00000463487 TRAPPC9Q96Q05 1148 aa19.1■□□□□ 0.65
COL9A3-204ENST00000463487 VPS11Q9H270 941 aa19.1■□□□□ 0.65
COL9A3-204ENST00000463487 EPB41L4BQ9H329 900 aa19.1■□□□□ 0.65
COL9A3-204ENST00000463487 PCDHGA7Q9Y5G6 932 aa19.1■□□□□ 0.65
COL9A3-204ENST00000463487 HMX2A2RU54 273 aa19.09■□□□□ 0.65
COL9A3-204ENST00000463487 KRT87PA6NCN2 255 aa19.09■□□□□ 0.65
COL9A3-204ENST00000463487 E7ENX8 843 aa19.09■□□□□ 0.65
COL9A3-204ENST00000463487 NVLO15381 856 aaKnown RBP19.09■□□□□ 0.65
COL9A3-204ENST00000463487 GUCA1CO95843 209 aa19.09■□□□□ 0.65
COL9A3-204ENST00000463487 ALDOAP04075 364 aaKnown RBP19.09■□□□□ 0.65
COL9A3-204ENST00000463487 CD1DP15813 335 aa19.09■□□□□ 0.65
COL9A3-204ENST00000463487 ST6GAL1P15907 406 aa19.09■□□□□ 0.65
COL9A3-204ENST00000463487 CD82P27701 267 aa19.09■□□□□ 0.65
COL9A3-204ENST00000463487 PEBP1P30086 187 aaKnown RBP19.09■□□□□ 0.65
COL9A3-204ENST00000463487 ABATP80404 500 aa19.09■□□□□ 0.65
COL9A3-204ENST00000463487 TAP2Q03519 686 aa19.09■□□□□ 0.65
COL9A3-204ENST00000463487 TUBB3Q13509 450 aa19.09■□□□□ 0.65
COL9A3-204ENST00000463487 TBC1D25Q3MII6 688 aa19.09■□□□□ 0.65
COL9A3-204ENST00000463487 CAPN13Q6MZZ7 669 aaPredicted RBP19.09■□□□□ 0.65
COL9A3-204ENST00000463487 AGTRAPQ6RW13 159 aa19.09■□□□□ 0.65
COL9A3-204ENST00000463487 TRIM73Q86UV7 250 aa19.09■□□□□ 0.65
COL9A3-204ENST00000463487 GPSM1Q86YR5 675 aa19.09■□□□□ 0.65
COL9A3-204ENST00000463487 SPNS2Q8IVW8 549 aa19.09■□□□□ 0.65
COL9A3-204ENST00000463487 TCAIMQ8N3R3 496 aa19.09■□□□□ 0.65
COL9A3-204ENST00000463487 ISL2Q96A47 359 aa19.09■□□□□ 0.65
COL9A3-204ENST00000463487 FBXL8Q96CD0 374 aa19.09■□□□□ 0.65
COL9A3-204ENST00000463487 MED8Q96G25 268 aa19.09■□□□□ 0.65
COL9A3-204ENST00000463487 PRR11Q96HE9 360 aaPredicted RBP19.09■□□□□ 0.65
COL9A3-204ENST00000463487 OR6C1Q96RD1 312 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms